PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038931.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 267aa    MW: 29589.7 Da    PI: 7.7573
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038931.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.34.1e-12128102129
          NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
                  +kktLvfykgrap+gek++Wvmheyrle
  Pbr038931.1   1 MKKTLVFYKGRAPRGEKSNWVMHEYRLE 28 
                  8*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.693148IPR003441NAC domain
SuperFamilySSF1019413.14E-16148IPR003441NAC domain
PfamPF023658.6E-5127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MKKTLVFYKG RAPRGEKSNW VMHEYRLENK HPFKSSKEEW VVCRVFQKNI SALKKPQQAT  60
TSSQKQPTNE SPCDDTNSIV NEFGDIELPN LNSNINANSS SGFSNNISSP QSYYSNILDH  120
SKNNINDVTN MSLKMTWAAT AAREAAANAL SLPSSLLSPS NLSVNSLLLR ALQLRSSTNN  180
NGSNYQPRAT NHVQATAGTS TLDYSSYDHI QQQGMMPSMS HHFGSSTTMD HINSNFQASS  240
SSTNDQMMES MPLQHSEQPF NLDSIW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038931.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC8472232e-37KC847223.1 Gossypium hirsutum NAC domain protein NAC46 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008393314.21e-158protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A498I8911e-158A0A498I891_MALDO; Uncharacterized protein
STRINGXP_009360186.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49463356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-29NAC domain containing protein 58