PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038530.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 100aa    MW: 11311.9 Da    PI: 10.7171
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038530.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-202978255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a++ a+++l+g
  Pbr038530.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDDAARRLYG 78
                 69****999.**********965...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.33E-282888No hitNo description
PfamPF008471.2E-132878IPR001471AP2/ERF domain
SMARTSM003806.5E-382992IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-312987IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-222987IPR016177DNA-binding domain
PROSITE profilePS5103222.5372986IPR001471AP2/ERF domain
PRINTSPR003675.1E-113041IPR001471AP2/ERF domain
PRINTSPR003675.1E-115268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
MDNSRKSPLK PWKKGPTRGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD DAARRLYGPE AFLNLPHLQP SSNRLFCYG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-182986563ATERF1
3gcc_A2e-182986563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038530.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not induced by high-salt and drought stresses. {ECO:0000269|PubMed:20049613}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN2044271e-136JN204427.1 Malus prunifolia dehydration-responsive element binding protein (DREB2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008350282.13e-63dehydration-responsive element-binding protein 2F
RefseqXP_009340780.13e-63PREDICTED: dehydration-responsive element-binding protein 2F-like
SwissprotQ10R181e-47DRE2E_ORYSJ; Dehydration-responsive element-binding protein 2E
TrEMBLI6N9Z47e-62I6N9Z4_9ROSA; Dehydration-responsive element binding protein
STRINGXP_009340780.11e-62(Pyrus x bretschneideri)
STRINGXP_008350282.11e-62(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54773150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.13e-37ERF family protein