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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr038414.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
WRKY |
Protein Properties |
Length: 531aa MW: 56990 Da PI: 8.6183 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr038414.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 103.6 | 1.1e-32 | 244 | 300 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dD ynWrKYGqK vkgsefprsYY+Ct+ +Cpvkkkvers ++++ei+Y+g+Hnhe
Pbr038414.1 244 DDSYNWRKYGQKLVKGSEFPRSYYKCTHMNCPVKKKVERSP-SGEITEIIYKGQHNHE 300
8****************************************.9**************8 PP
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2 | WRKY | 105.9 | 2.1e-33 | 416 | 474 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+++d k+v++tYeg+Hnh+
Pbr038414.1 416 LDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHVERASTDAKAVITTYEGKHNHD 474
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 531 aa
Download sequence Send
to blast |
MTAKTQGSNR VTVSAPPPQQ QPQRPVIPPP PRPSAEALFS GGSGASPGPM TLVSSFFETY 60 PESDFRSFSQ LLAGAMGSPV GSTRGMSFFS DNPADGLGKS GGGSEYGGEG SSGFKQSRPM 120 SLAVARPPLF TVPPGLSPSG LLNSPGFYSP QSPFGMSHQQ ALAQVTAQAA LAQSRVYMQP 180 DYQPSSVAAP TEPQACQPSL MPEEASRQLT LPSTSDTKSS VRQSSEASHS DGKYQPSSTD 240 RPADDSYNWR KYGQKLVKGS EFPRSYYKCT HMNCPVKKKV ERSPSGEITE IIYKGQHNHE 300 VPQPSKRPKD GDLNGPKPEN GLQRRVGDSN RLSENVASHS QPEKDQESTG AASGQLPGGS 360 DNEELGDGET REGGDADEPN AKRRNVDVGA SEVALPQKMV TEPKIIVQTT SEVDLLDDGY 420 RWRKYGQKVV KGNPHPRSYY KCTFAGCNVR KHVERASTDA KAVITTYEGK HNHDVPAARN 480 SSHSTANNSA SQLKPPASGA PQHTLLKGRE YGNNDQRPVL LQLKEEQIVV *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP052939 | 0.0 | KP052939.1 Pyrus pyrifolia WRKY transcription factor mRNA, partial cds. |