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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr038280.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 214aa MW: 22636.3 Da PI: 10.7709 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr038280.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 24 | 74 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++++GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa a+++a+++++g
Pbr038280.1 24 TRFRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAACAYDKAAREFRG 74
589*******.**********8...557************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MAPTTEKSPP KSGSEDPHPT SNETRFRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE 60 AACAYDKAAR EFRGGKAKTN FPTPTELHLD AVNIANMNNA AKLAATTNIS NSPSSHSSTV 120 ESSSPPSPRP LDLTLKTPRL STGGGYFTAA SHQAQATATR PRPRSSTSSA PPATGGSIST 180 STFLPPQKSP KLPPPAAKDP PFFLSGASLF LFM*
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways, and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA) and by Alternaria brassicicola (locally and systemically), but only slightly by ethylene. Strong induction by wounding, cold or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU732481 | 0.0 | GU732481.1 Malus x domestica AP2 domain class transcription factor (AP2D57) mRNA, complete cds. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Cao WH, et al.
Modulation of ethylene responses affects plant salt-stress responses. Plant Physiol., 2007. 143(2): p. 707-19 [PMID:17189334] - Lyons R, et al.
The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation. Sci Rep, 2013. 3: p. 2866 [PMID:24104185] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Gao S, et al.
A cotton miRNA is involved in regulation of plant response to salt stress. Sci Rep, 2016. 6: p. 19736 [PMID:26813144] - Zhou X, et al.
The ERF11 Transcription Factor Promotes Internode Elongation by Activating Gibberellin Biosynthesis and Signaling. Plant Physiol., 2016. 171(4): p. 2760-70 [PMID:27255484] - Liu W, et al.
The ethylene response factor AtERF4 negatively regulates the iron deficiency response in Arabidopsis thaliana. PLoS ONE, 2017. 12(10): p. e0186580 [PMID:29045490]
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