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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr037846.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 250aa MW: 27646.4 Da PI: 7.0925 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr037846.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.5 | 4.5e-20 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa a+++a++k++g
Pbr037846.1 55 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAAIAYDNAALKFKG 104
7********.**********94....45************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0071497 | Biological Process | cellular response to freezing |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MSAMVSALTQ VIGTTDDHAA VQPNPTSISD SSLLVKQEPD RSQPVQDQEP VRRRHYRGVR 60 QRPWGKWAAE IRDPKKAARV WLGTFETAED AAIAYDNAAL KFKGTKAKLN FPERVQGKTD 120 FGILMGSSGS TTSSSGAAST QRTQNLMTPA GHIVNPQRAT APLMMSQQPE TFPDLYQYAR 180 LLSGNDADFY NYSSYPFNQD PRFTSQFLPS STHFSSSTAS QDSQPSQQRQ QDHEEDGGNK 240 DWNLSNPRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Acts as positive regulator of tolerance to waterlogging stress. Delays waterlogging-induced premature senescence by regulating stomatal closure and antioxidant enzyme activity. May function through ABI1-mediated abscisic acid (ABA) signaling pathway (PubMed:22661072). Involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:21911380, ECO:0000269|PubMed:22661072}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress (PubMed:16133218, PubMed:21069430). Induced drought stress, jasmonate (JA), salicylic acid (SA), abscisic acid (ABA) and ethylene. Down-regulated by freezing stress (PubMed:21069430). Induced by wounding in the flowering stem (PubMed:21911380). Induced by waterlogging. {ECO:0000269|PubMed:16133218, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:21911380}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM506583 | 0.0 | KM506583.1 Eriobotrya japonica transcription factor ERF17 (ERF17) mRNA, complete cds. |
Publications
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- Huang Z,Zhao P,Medina J,Meilan R,Woeste K
Roles of JnRAP2.6-like from the transition zone of black walnut in hormone signaling. PLoS ONE, 2013. 8(11): p. e75857 [PMID:24265672] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Asahina M,Satoh S
Molecular and physiological mechanisms regulating tissue reunion in incised plant tissues. J. Plant Res., 2015. 128(3): p. 381-8 [PMID:25736731] - Hickman R, et al.
Architecture and Dynamics of the Jasmonic Acid Gene Regulatory Network. Plant Cell, 2017. 29(9): p. 2086-2105 [PMID:28827376] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470] - Matsuoka K, et al.
RAP2.6L and jasmonic acid-responsive genes are expressed upon Arabidopsis hypocotyl grafting but are not needed for cell proliferation related to healing. Plant Mol. Biol., 2018. 96(6): p. 531-542 [PMID:29344830] - Yang S,Poretska O,Sieberer T
ALTERED MERISTEM PROGRAM1 Restricts Shoot Meristem Proliferation and Regeneration by Limiting HD-ZIP III-Mediated Expression of RAP2.6L. Plant Physiol., 2018. 177(4): p. 1580-1594 [PMID:29884678]
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