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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr037501.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
bHLH |
Protein Properties |
Length: 449aa MW: 49932.5 Da PI: 6.9321 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr037501.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 24.6 | 4.6e-08 | 351 | 393 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ r+RR+ri +++ L++l+P K++ a++L +A +Y+k L
Pbr037501.1 351 AAARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 393
567*******************95.....5****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 449 aa
Download sequence Send
to blast |
MDGLDWDGSH ITNTSTLLWS NHQVHDLEES LLLSNSSSSA FIPIQELPKV QTSHVIMNSN 60 TERSSNIGTH QIAHQKNRCG LDSVHDMPTL RADELCQSPL NISRPYNLMS SLSTSTFMAA 120 DHYGNIGKHV QPQANFHGLR DQHVKAKPAT TCSVESLDCL LSATNSNTDT SVEDDDGISM 180 LFSDCRRNLW NFRAGNNSAN SSGDSENNAT VVSQSSSDLY VQIQGKPNST KRSHDQSEPK 240 LHGANYSHFG LLQKDYSSTI EGDFRLISEN PPKPKKLRSD NKHPSSSNIS FQQPCSSVPT 300 SSIEEPDPEA IAQMKEMIFR AAAFRPVNLE LEMVERPKRK NVKISSDPQT AAARQRRERI 360 SERIRVLQRL VPGGSKMDTA SMLDEAANYL KFLRSQVKAL ENLGQKIESM SNFNPPTSFA 420 FSFNPSFPMQ THNHNPLQNP YHIDQTHS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010548 | 2e-54 | AP010548.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT22C05, TM1867a, complete sequence. |
GenBank | FJ379751 | 2e-54 | FJ379751.1 Lotus japonicus putative basic helix-loop-helix protein BHLH11 gene, complete cds. |