PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr037289.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 388aa    MW: 43747 Da    PI: 5.0494
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr037289.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.81.3e-2081371128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  +p GfrFhPtd+elv+ yL+ ++ + k   + +i+e++++ ++ Pw   +++ +    +++++fF + ++++ ++ r++r + + g+W++t +dk + 
  Pbr037289.1   8 MPLGFRFHPTDQELVSSYLRDRALSGKPLGKPFIQEFNLFgQTPPWVVWEQFGGnslLDQDLFFFYQLRSRSDSDGRSKRqIEAGGTWSETSSDKVLG 105
                  699*****************9988777566578****9872567888865443322345577777777777777777777466799*******99888 PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g  +g k  + + ++   + ++  W+++ey+l
  Pbr037289.1 106 L-DGIPIGDKGHFRYNNK--GSNNNGGWLLEEYSL 137
                  8.9************843..333579*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-244152IPR003441NAC domain
PROSITE profilePS5100526.7088155IPR003441NAC domain
PfamPF023651.8E-149137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MEVGYYGMPL GFRFHPTDQE LVSSYLRDRA LSGKPLGKPF IQEFNLFGQT PPWVVWEQFG  60
GNSLLDQDLF FFYQLRSRSD SDGRSKRQIE AGGTWSETSS DKVLGLDGIP IGDKGHFRYN  120
NKGSNNNGGW LLEEYSLLPN VVTGPKVVLS RLKRNLRSRC GSKMNSSSPT HDFNEKPPIK  180
RARKEVSNEK PLIKRKRPRK EPGSQKHSNV NVITNTPAVV PFVGIESNMI TDTRYDDQEC  240
ITNINGNMKP TDFSDPDSVI LMSDVPSYPI CLDSDTSNHD QGCISYINGY VMPFPTHISD  300
HEYVPLMSDV PSSPIFLGGR EYPLDGEAVR GDVKEWLTTL EGKLPQEWPQ IDEFSQLLDG  360
FNYWTDCLWM SDSANDQWRD VEVTAAV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr037289.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954569.10.0NAC domain-containing protein 41-like
TrEMBLA0A498K0F40.0A0A498K0F4_MALDO; Uncharacterized protein
STRINGXP_009344383.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3804722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.29e-08NAC domain containing protein 41