PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035738.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 203aa    MW: 22895.1 Da    PI: 8.6693
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035738.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.71.2e-1591522128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk.......kvkaeek.ewyfFskrdkkyatgkrknratk..sgy 82 
                  p +frF+Ptd+el++++L+  + +++      + ++++++++++  ++eP+++ +       +++a ++  +yfFs+  kk+++g++  r++    g 
  Pbr035738.1   9 PSCFRFKPTDQELISRFLRYFLVETPrllppPPHHTFMHKCNLFgnHSEPSEIWEafgggalQLTAADQpALYFFSELTKKTPKGSNIVRKMGrnGGK 106
                  889*****************99999889987555567****98622679****7447888774444444488**************999964434899 PP

          NAM  83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  W  +     v  +  +++ +glk+t+ + +  +++  +  W+++ey+l
  Pbr035738.1 107 WDGKAVPAWVEGTdgTSTCIGLKRTFCYKNVCSED--HGAWLLDEYSL 152
                  *988888888776545566*********9665555..89*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-196177IPR003441NAC domain
PROSITE profilePS5100521.5238177IPR003441NAC domain
PfamPF023655.5E-1210152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MEINHSLVPS CFRFKPTDQE LISRFLRYFL VETPRLLPPP PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGAL QLTAADQPAL YFFSELTKKT PKGSNIVRKM GRNGGKWDGK AVPAWVEGTD  120
GTSTCIGLKR TFCYKNVCSE DHGAWLLDEY SLFAAPRKRK SHTSYDFDYV LCRLRKTSDI  180
NKRKCPTSSS SEDDQVAALL DK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161KRKSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035738.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343321.11e-152PREDICTED: protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A498KEC12e-74A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009343321.11e-151(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.23e-08NAC domain containing protein 38