PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035737.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 298aa    MW: 33377.3 Da    PI: 6.1122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035737.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM491.9e-1591532128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvka.eekewyfFskrdkkyatgkrknratk..sg 81 
                  p +frF+Ptd+el+ ++L+  + +++      + ++++++++++  ++eP+++ +        +++a ++  +yfFs+  kk+++g++  r++    g
  Pbr035737.1   9 PSCFRFKPTDQELIGRFLRYFLVETPrllppPPHHTFMHKCNLFgnHSEPSEIWEafggggalQLAApDQPALYFFSELMKKTPNGSKIVRKMGrnGG 106
                  889*****************99999889987555567****98622679****74477888764444244588***************9996543489 PP

          NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   W  +     v  +  +++ +glk+t+ + +  + +  +  W+++ey+l
  Pbr035737.1 107 KWDGKAVPAWVEGTdaTSTSIGLKRTFCYKN--EGSEDHGAWLLDEYSL 153
                  9*988777777665657778********984..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-186178IPR003441NAC domain
PROSITE profilePS5100522.5318178IPR003441NAC domain
PfamPF023651.2E-1110153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MEINHSLVPS CFRFKPTDQE LIGRFLRYFL VETPRLLPPP PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGGA LQLAAPDQPA LYFFSELMKK TPNGSKIVRK MGRNGGKWDG KAVPAWVEGT  120
DATSTSIGLK RTFCYKNEGS EDHGAWLLDE YSLFAAPRKR KSHTSYDFDY VLCRLRKTSD  180
INKRKCPTSS SSEDDQVTAL KKNGINKRNC PTSSSSEDQV TTSNERNKKM RANEEIKSDD  240
DQELPQPADS GIAALGAVEE NAWDPSLLEK YLLETHEEEP LNPSFYNEWI AADGGVQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KRKSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035737.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343320.10.0PREDICTED: protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A498KEC13e-80A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009343320.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.17e-09NAC domain containing protein 67