PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035736.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 340aa    MW: 38090.3 Da    PI: 5.0363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035736.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.21.4e-1491532128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvka.eekewyfFskrdkkyatgkrknratk..sg 81 
                  p +frF+Ptd+el+ ++L+  + +++      + ++++++++++  ++eP+++ +        +++a ++  +yfFs+  kk+++g++  r++    g
  Pbr035736.1   9 PSCFRFKPTDQELIGRFLRYFLVETPqllppPPHHTFMHKCNLFgnHSEPSEIWEafggggalQLAApDQPALYFFSELTKKTPNGSNIVRKMGrnGG 106
                  889*****************99988889887555567****98622679****74477888764444244588**************99996443489 PP

          NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   W  +     v  +  +++ +glk+t+ + +  +++  +  W+++ey+l
  Pbr035736.1 107 KWDGKAVPAWVEGTdgTSTCIGLKRTFCYKNVCSED--HGAWLLDEYSL 153
                  9*988888888776545566*********9665555..89*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-186178IPR003441NAC domain
PROSITE profilePS5100521.4518178IPR003441NAC domain
PfamPF023652.5E-1110153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MEINHSLVPS CFRFKPTDQE LIGRFLRYFL VETPQLLPPP PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGGA LQLAAPDQPA LYFFSELTKK TPNGSNIVRK MGRNGGKWDG KAVPAWVEGT  120
DGTSTCIGLK RTFCYKNVCS EDHGAWLLDE YSLFAAPRNR KSHTSYDFDY VLCRLRKTSD  180
NNNRKCPRTS SSEDDQVTAS TKNSINKRKC PTSSSSEDQV TTSNKRTKKK SANEEIEGDN  240
DQELLLPADS GIAADGAVEE NVWDPSLLEK YLLETHEEEP LNPSFYKEWI AADGGVQEAY  300
HPNAYENVLD QSYYGSSYPN NACLEDQFMP PINIAQEIL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035736.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343318.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A498KEC12e-84A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009343318.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2762223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.26e-06NAC domain containing protein 38