PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035735.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 369aa    MW: 41199 Da    PI: 4.7566
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035735.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.33.8e-1681531128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk..s 80 
                  +p GfrF+Ptd+el+ ++L+  + +++      + ++++++++++  ++eP+++ +        +++a ++  +yfFs+  kk+++g++  r++    
  Pbr035735.1   8 VPTGFRFKPTDQELIGRFLRYFLVETPrllppPPHHTFMHKCNLFgnHSEPSEIWEafgggqalQLAAADQpALYFFSELTKKNPKGSNIMRKMGrsG 105
                  589******************99999889987555567****98622679****74478888774444444488**************9999654447 PP

          NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  g W  +     v  +  +++ +glk+t+ + +  +++  +  W+++ey+l
  Pbr035735.1 106 GNWDGKAVPAWVEGTdgTSTCIGLKRTFSYKNVGSED--HGAWLLDEYSL 153
                  89*988888888776545566*********9654444..79*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-187177IPR003441NAC domain
PROSITE profilePS5100523.3778178IPR003441NAC domain
PfamPF023651.8E-129153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MEITHSLVPT GFRFKPTDQE LIGRFLRYFL VETPRLLPPP PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGQA LQLAAADQPA LYFFSELTKK NPKGSNIMRK MGRSGGNWDG KAVPAWVEGT  120
DGTSTCIGLK RTFSYKNVGS EDHGAWLLDE YSLFAAPRKR KSQTSYDFDY VICRLRKTCP  180
SSSSSEDDQV TASMKDGINK RKCPTSPSLE DQVTTSNKRK KKQRANEEIK SDDDQEAGSK  240
QNMNLIDVVE EEKGQGNSCL TSNDPRLTIT VAESNEIVDR APTDGAVAEE VLSPTAFALK  300
QFLLSEPEEV LMPTASEVAG DERVEELYAE LKEVLHPSMD DCWDRLQLQS LDGDDFWSST  360
FMDEHLNV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199221KRKCPTSPSLEDQVTTSNKRKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035735.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385003.20.0uncharacterized protein LOC103447583
TrEMBLA0A498KEC11e-90A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_008385003.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.11e-08NAC domain containing protein 67