PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034579.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 328aa    MW: 36792.1 Da    PI: 4.4957
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034579.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.91.7e-1891463128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevdi..ykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkd 89 
                   Gf+F+Ptd+el++++L+  + +++     + +++i+e+++  +++eP+++ +     ++ +++ +yfFs+ +k ++ g+r  r++   g+W+     
  Pbr034579.1   9 CGFHFKPTDQELIHCFLRDFLMNREplllPPYNTIIHECNLfgNRSEPSEIWEayegGAQRTDQALYFFSELKKLNPMGSRIDRKIGsGGTWNIGKAV 106
                  7*******************999998997667678****9833478*****742444344456688******************6552789*955444 PP

          NAM  90 kevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   + ++    + + +glk+t+ + +  + +  + +W+++ey+l
  Pbr034579.1 107 ATWVNGtdgNPSPIGLKRTFCYKN--EGSEDNGRWLLDEYSL 146
                  4444434545556********984..3333578*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.1257171IPR003441NAC domain
SuperFamilySSF1019418.89E-217170IPR003441NAC domain
PfamPF023657.9E-1310146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MDNHSLVLCG FHFKPTDQEL IHCFLRDFLM NREPLLLPPY NTIIHECNLF GNRSEPSEIW  60
EAYEGGAQRT DQALYFFSEL KKLNPMGSRI DRKIGSGGTW NIGKAVATWV NGTDGNPSPI  120
GLKRTFCYKN EGSEDNGRWL LDEYSLFASP RKNYRDSRYD FDYVLCRLRK DGSPGINKRK  180
CSTSEDQATS SKKKCADEKI EKDDDHEGSK QIVNAINAVE EEGPQGTSCL TNDLVAFDHD  240
QINEFTVRYD VAAYDYDIDP KVAEKMTINV AKLEEPEELL GQEFQEVPLP TASGVVVADG  300
EQALNSSMLE ELIKETQELP LPACGIA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034579.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956332.12e-95uncharacterized protein LOC114824097
TrEMBLA0A498K1411e-128A0A498K141_MALDO; Uncharacterized protein
STRINGXP_009358234.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.18e-12NAC domain containing protein 32