PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034050.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 167aa    MW: 18979.7 Da    PI: 9.6791
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034050.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.32.1e-2191431128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.w.dLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkdkevls 94 
                  lp+G++F+P+d+el+ ++L++kv+g +l++ ++  e+d+y  e  w +L    +++e+ +yfF+  +kk+++ +r +r+ + g   Wk++ +dk+v++
  Pbr034050.1   9 LPVGCHFEPSDKELLLHFLNNKVHGLPLSC-NAAIECDLYGNEKtWrQLF--DQTGERCLYFFTVLKKKTEKASRVERTSSGGCviWKSQ-NDKPVKA 102
                  799***************************.6667899998764131443..34567788******************88877666*977.6789988 PP

          NAM  95 k......kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  k      +++ +g k+++ +   +g++ +  k dWvm  +rl
  Pbr034050.1 103 KrdpresTETRIGFKRMFSYVpkEGSK-SKAKGDWVMYKFRL 143
                  87777666666**********744444.447*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-234151IPR003441NAC domain
PROSITE profilePS5100522.5319165IPR003441NAC domain
PfamPF023657.0E-1410143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
METASSLGLP VGCHFEPSDK ELLLHFLNNK VHGLPLSCNA AIECDLYGNE KTWRQLFDQT  60
GERCLYFFTV LKKKTEKASR VERTSSGGCV IWKSQNDKPV KAKRDPREST ETRIGFKRMF  120
SYVPKEGSKS KAKGDWVMYK FRLDDSFLNK NNKVSNTNTC LINLQS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034050.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341990.11e-113PREDICTED: NAC transcription factor ONAC010-like
TrEMBLA0A314YZH45e-64A0A314YZH4_PRUYE; NAC domain-containing protein 79-like
STRINGXP_009341990.11e-112(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1763745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-14NAC domain containing protein 57