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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr032608.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 452aa MW: 50282.9 Da PI: 7.4644 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr032608.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 207 | 257 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
Pbr032608.1 207 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 257
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009651 | Biological Process | response to salt stress |
GO:2000070 | Biological Process | regulation of response to water deprivation |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 452 aa
Download sequence Send
to blast |
MSSPKKSGKS KMETSGEWEA NKDKELDFSF ERPPWKPGFS EASTASNRPL KKVKSPERQD 60 PIQASPSLAH HQTPSPIIAP HPSSSSSKIV FPFSFDGSQQ PMMQFPHPFN PTNLPMFPSP 120 IQQQQQQNPQ QMISFESHQQ QQQQGMSYPS PFVGESVSWQ QHQKMLQHWS DALNLSPRGR 180 VMMMNRLGPD GRPMLRPPAM PYNTTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA 240 EDAAMAYDRE AFKLRGENAR LNFPELFLNK DKSDVSVSSA PGSATISPPR HEGSKPTGHR 300 KQPQKIKRSA SNIEAMPPPP IPHTQEENST DNDSGLESSE AKAIDEVEAN TDGAGGGSSQ 360 QKEIVWGDMA EDWLNAIPAG WGPGSPVWDD LDTNNSLLLQ SDLPFTNPNQ QDYNININPQ 420 QAIQNSGSGS GSGSSSSSSY PMKNLFWKDQ N*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ669822 | 0.0 | JQ669822.1 Malus x domestica dehydration-responsive element-binding protein (DREB6) (DREB6-1) mRNA, partial cds. |