PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032236.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 544aa    MW: 62177.2 Da    PI: 5.4116
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032236.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM124.68.2e-39181351127
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  +p GfrF+Pt+eel+++yL+ k+egk+  +++vi+e++i+++ePwdLp        ewyfFs+ +k++   ++++ratk+g+Wk tg +k+v+++ ++
  Pbr032236.1  18 MPLGFRFRPTEEELIDYYLQMKLEGKDYLVSDVIREINICSHEPWDLP--------EWYFFSTYKKNN--RNQTERATKNGFWKITGAQKPVKTQdNR 105
                  699************************9999****************9........8*****998865..569********************99666 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyr 127
                  + +g k++L+fy+g+ +++++t+W mhey 
  Pbr032236.1 106 TIIGKKRILTFYRGTVRNSQRTNWGMHEYY 135
                  679**************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-419156IPR003441NAC domain
PROSITE profilePS5100541.61618156IPR003441NAC domain
PfamPF023651.1E-2219135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MAANRNRFTR AAAGDLTMPL GFRFRPTEEE LIDYYLQMKL EGKDYLVSDV IREINICSHE  60
PWDLPEWYFF STYKKNNRNQ TERATKNGFW KITGAQKPVK TQDNRTIIGK KRILTFYRGT  120
VRNSQRTNWG MHEYYIPQTN PNANQRDFVL CCVKKKLGEN VDAANCDEGE YITYNNESDF  180
ENQLLRALGM DIEEEHTQQQ QSMDYFEREE GRMLASAPGN NDYHGLQYAF GADEPDDKFA  240
EFLNSIIVDR DQDETTHANI FNVSTHPDTT HANIFNDSTL PESITRVYFE DEALSSDADT  300
EILLAQEMSL QMLSEPPVDS SHSRRQEGVM LCQAQAASSV NVVPKPQTDH LQVVTDEHSG  360
IHRRQLVNDE HSGTHQRTSR PQRESRHNNA LNVKNASSVD VDAELPQIKC IRLAPDEYYN  420
NERTRRRTNP TSALEALSKQ KELKQQQSKA KEAAELRAAV DFPPKLTSIS KSNKEAEVAQ  480
GNNAEKGVKQ TQNTTITCNW KGCSFISWET SPPLTSPPSE YLFNMFLGII MFCFFAWQVI  540
LYG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-2471344138Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032236.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028955820.10.0NAC domain-containing protein 69-like isoform X1
TrEMBLA0A498KPD60.0A0A498KPD6_MALDO; Uncharacterized protein
STRINGXP_009340834.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.11e-35NAC 014