PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032231.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 417aa    MW: 48137.4 Da    PI: 6.596
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032231.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.95.4e-42161421126
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lp+GfrF+Pt+eel+++yL+ k+eg +  +++vi+e++i+++eP+dLp+   +++++kewyfFs+ +k++  +++++ratk+g+Wk tg++k+v+++ 
  Pbr032231.1  16 LPVGFRFRPTEEELIHYYLQMKLEGMDYVFNHVIHEINICDHEPRDLPElsPIDSDNKEWYFFSTYKKNS--KNQTERATKEGFWKITGTQKPVKTEd 111
                  79*************************999999**************94447788999******998865..569********************996 PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmhey 126
                  k++++g k++L+fy+gr ++++ktdWvmhey
  Pbr032231.1 112 KRTVIGEKRILTFYQGRVRNSRKTDWVMHEY 142
                  66779************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-4510163IPR003441NAC domain
PROSITE profilePS5100544.92916163IPR003441NAC domain
PfamPF023655.6E-2417142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MAAKGIHSTR VGDMLLPVGF RFRPTEEELI HYYLQMKLEG MDYVFNHVIH EINICDHEPR  60
DLPELSPIDS DNKEWYFFST YKKNSKNQTE RATKEGFWKI TGTQKPVKTE DKRTVIGEKR  120
ILTFYQGRVR NSRKTDWVMH EYYPQTNHND NQRDLVVCCL KKKSGEKVDA ANCHELESST  180
NNASDFGNQQ LLAPRMDIEE EHTPQQQSMD IFERAKCRML ASASGNDYHD MPSESGANEH  240
DETIEDFVNS VIDWAAVNSP IDQDAMLIEP PVDSSHSRRH EDVKLYQIQA ASSVNLVPKP  300
QTDRIQAVAD EHSGTHRRQL VNDEHSTTHQ RTSRPQRESR HSNALNVKNA SSVDVDAELP  360
QINRSQLAPE EYHNNERTRR RTYPTSALEA LSKQKELKQP QRKVRENPKL QHGERE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-241616317165NO APICAL MERISTEM PROTEIN
1ut4_B6e-241616317165NO APICAL MERISTEM PROTEIN
1ut7_A6e-241616317165NO APICAL MERISTEM PROTEIN
1ut7_B6e-241616317165NO APICAL MERISTEM PROTEIN
4dul_A6e-241616317165NAC domain-containing protein 19
4dul_B6e-241616317165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032231.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028955827.10.0NAC domain-containing protein 5-like isoform X2
TrEMBLA0A498KGZ20.0A0A498KGZ2_MALDO; Uncharacterized protein
STRINGXP_009340839.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.11e-38NAC 014