PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032229.2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 395aa    MW: 45231.2 Da    PI: 4.6372
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032229.2genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.11e-37511783128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                  +G+rF+Pt ee+v++yLk k ++k ++  ++i+e+d+++++PwdL +++ +++  wyfFs+++ ky +++r nr+t  g Wk tgk+++v+++ ++++
  Pbr032229.2  51 VGVRFNPTPEEMVDHYLKLKKQDKGFKS-DHIAEFDVCNLDPWDLAARIPSDDMVWYFFSPKEYKYINSTRYNRTTPGGQWKMTGKERPVKARlSKAV 147
                  7**************************9.89**************99999999***************************************988899 PP

          NAM 100 vglkktLvfyk..grapkgektdWvmheyrl 128
                  +g k+tL+fy+  g ++k +kt+Wv hey+l
  Pbr032229.2 148 IGKKRTLTFYQrcGPQRKLKKTNWVRHEYSL 178
                  **********6336788889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-4148201IPR003441NAC domain
PROSITE profilePS5100541.77849202IPR003441NAC domain
PfamPF023651.2E-1951178IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MLLEYSEVSY KLLCSCTFIS VQTSLAQTQR EKKHMGTQGS NRKTGGVSDA VGVRFNPTPE  60
EMVDHYLKLK KQDKGFKSDH IAEFDVCNLD PWDLAARIPS DDMVWYFFSP KEYKYINSTR  120
YNRTTPGGQW KMTGKERPVK ARLSKAVIGK KRTLTFYQRC GPQRKLKKTN WVRHEYSLID  180
SEANSNPKLR QKDFVLNRMK KEFDEEDTSI GEVELGSYSV SNVEDHAAAA VTPESQDYSS  240
STFLSSGYIE PGDVLQANGT NYDCNAIQSP FGDNHYSYID KNDISNYDKG DLFTMSDFEN  300
ELVDDMCQEP RVGDFYSPFT YKNNISANDE NEAVSYTAYD FENQNADDMI QEVCLPREED  360
LELAFYLPQL EDYTLEPPIN KKVGDVLHDN NYVY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-25342023165NO APICAL MERISTEM PROTEIN
1ut4_B4e-25342023165NO APICAL MERISTEM PROTEIN
1ut7_A4e-25342023165NO APICAL MERISTEM PROTEIN
1ut7_B4e-25342023165NO APICAL MERISTEM PROTEIN
4dul_A4e-25342023165NAC domain-containing protein 19
4dul_B4e-25342023165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032229.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009340840.10.0PREDICTED: NAC domain-containing protein 83-like
TrEMBLA0A498KR720.0A0A498KR72_MALDO; Uncharacterized protein
STRINGXP_009340840.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.17e-32NAC 014