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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr031829.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
GATA |
Protein Properties |
Length: 269aa MW: 29425.6 Da PI: 6.0328 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr031829.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49 | 8.3e-16 | 224 | 259 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34
C +Cgt + Tp++Rrgpdg++tLCnaCGl+++ k
Pbr031829.1 224 CLHCGTNEkcTPMMRRGPDGPRTLCNACGLMWANKA 259
99******************************9875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MDNISGGDAP MHMSDEVHLQ YMQEHEHHQG LHQMSNGNGV ADDHDDGSGA DTGGAELSEV 60 HVQSEPVNLS DTRSGMVDHS SNNGDQLTLS FQGQVFVFDS VSPEKVQAVL LLLGGHEVPP 120 GMPAVPVTTQ HDNRALTSIP QRLSVPQRLA SLIRFREKRK ERNFDKKIRY TVRKEVALRM 180 QRKKGQFTSS KPNSDDSASA ITSWGSNENL DQDANGSIPQ EAVCLHCGTN EKCTPMMRRG 240 PDGPRTLCNA CGLMWANKAH DGDDFWNG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |