PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr031777.3
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family BES1
Protein Properties Length: 686aa    MW: 76272.2 Da    PI: 6.5081
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr031777.3genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822134.21.4e-41591951131
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpl..eeaeaagssas...aspes 92 
                  gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ k++ p     ++aa++s+s   +sp +
  Pbr031777.3  59 GGARRCRPLEEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINNVVAALAREAGWVVLPDGTTFPsKSQGPRlaGVNSAAVTSSSsqiVSPRT 156
                  6899*****************************************************************95555555773334444444312467777 PP

       DUF822  93 slqsslkssalaspvesysaspksssfpspssldsisla 131
                  + +++ ++s  +sp e  ++ +k +  ps s +   s+a
  Pbr031777.3 157 PASLKGVTSGYQSPGELNASNTKGVYLPSLSPYVLPSSA 195
                  777777889999999999999999999998877655444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.5E-3761187IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.19E-171240671IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.4E-188242671IPR013781Glycoside hydrolase, catalytic domain
PfamPF013732.1E-102249660IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68280294IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68301319IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68323344IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060327335IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008422.0E-6398407IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.2E-68408430IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68481500IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68515531IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68532543IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.2E-68550573IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.0E-6553563IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.2E-68590612IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.0E-6641655IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008422.0E-6656670IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    Send to blast
MEMDVKEEDS GDDEDGEKHV DASQMMAGVD GEMPTISNNN NRLQQHHQFQ EQVGTPGGGG  60
ARRCRPLEEK ERTKLRERQR RAITARILAG LRRHGNYNLR VRADINNVVA ALAREAGWVV  120
LPDGTTFPSK SQGPRLAGVN SAAVTSSSSQ IVSPRTPASL KGVTSGYQSP GELNASNTKG  180
VYLPSLSPYV LPSSAQSQGS SIVGDGAGQT ESHPLSGGSL DNVGYKQIVD IPLKLQERDF  240
SSTAYIPVYV MLPLGVINMK CELVDPDGLL KQLRVLKSVN VDGVMVDCWW GIVEGHAPQE  300
YNWNGYKRLF QMVRELKLKL QVVMSFHECG GNVGDDVCIP LPHWVAEIGR SNPDIFFTDR  360
EGRSNAECLS WGIDKERVVY LDCMRSFRVE FDEYFKNGSI SMIQVGLGPC GELRYPSCPV  420
KHGWRYPGVG EFQCYDQYLL KSLRKAAEAR GHSFWGRGPD NAGSYNSQPN DTGFFSEGGD  480
YDGYHGRFFL NWYSRVLVDH GDRVLSLAKL TFDGTCIAAK LSGLHWWYKT VSHAAELTAG  540
FYNPCNRDGY SPIVTMLKKH EANLSLACTE LHMLGQHEDF KEALGDSEGL FWQVLNAAWD  600
VCLPVSSENA LACHDRISYN KILDNAKPLT DPDGRHLSSF TYLRLSPLLM ERDNLMEFER  660
FVKRMHGKTA FTTALFLIQF DALLI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wds_A1e-13924567111447Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr031777.3
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009340422.10.0PREDICTED: LOW QUALITY PROTEIN: beta-amylase 7
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A498KK020.0A0A498KK02_MALDO; Beta-amylase
STRINGXP_009340422.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]