PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr031505.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 497aa    MW: 56686.9 Da    PI: 4.7167
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr031505.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.31.7e-2481412128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkev 92 
                  p+G++FhP+deelv +yL++kv+g++++ e+vi+++d+y + e +d+ +    +  ++ +++yfF+  + +++  tg+r  r++ sg+W+   + ++v
  Pbr031505.1   8 PVGYKFHPRDEELVGYYLRNKVRGSPFKDENVIPDLDLYGSmEARDIWNnnggQNLGKGEDLYFFTILKPTSSkgTGSRMARTIGSGTWHGENSGTKV 105
                  89***************************99*******965499999632444323366789***9766555423799**************999999 PP

          NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  ++  ++e++g  k +++ + + p+ e+  W+mhe++l
  Pbr031505.1 106 KDPkTKETIGWWKRFTYANTKYPQ-ENGCWIMHEFSL 141
                  99867888**********988888.8999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.01E-274169IPR003441NAC domain
PROSITE profilePS5100529.8237170IPR003441NAC domain
PfamPF023651.4E-178141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MASANDFPVG YKFHPRDEEL VGYYLRNKVR GSPFKDENVI PDLDLYGSME ARDIWNNNGG  60
QNLGKGEDLY FFTILKPTSS KGTGSRMART IGSGTWHGEN SGTKVKDPKT KETIGWWKRF  120
TYANTKYPQE NGCWIMHEFS LDPKLAMYIK SNNSRTSNGD EYVVCRIRKN YDRKRKAEDR  180
EETRVVESQR NKIQRQFDNI DESYVTPVSS EVAEDVNTDH YPQQQKPQQE QQTNLQHNSF  240
VNNVDHYYNQ QQQEHCNVTD FPQYYYDSQE LMARPEAACP TLTSSLGMAN QEDYLQHHGF  300
VNNVTDLPQY DYSSTQDPSS GTVFSHYVLP QTSTTGFANQ PYHFVTQDQP NYFVADPTMA  360
SSLSMASQED YLQHNGFVNN VTDLPQYHYS SAQPSSGTVL SHYDPPQTGT TGFANHPHHF  420
VTQDQPNYCV ADSTMASSLA SPANIDQNYP VMNDKDQLPL PNFDYSQLFY EAEGDHDIMI  480
DLEDLWNDMV QPAAVL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr031505.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385925.11e-157NAC domain-containing protein 41-like
TrEMBLA0A498IL631e-174A0A498IL63_MALDO; Uncharacterized protein
STRINGXP_009357365.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.29e-21NAC domain containing protein 38