PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr031128.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 358aa    MW: 39088.4 Da    PI: 5.3207
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr031128.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.62.2e-14111352128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskk 96 
                  p G+rFhPtd+elv  yL+ ++ + k l +  +i e+   ++    L   +++a++k            ++ +r++r + + g+W+ t +dk +   +
  Pbr031128.1  11 PLGCRFHPTDQELVASYLRVRALAGKpLGI-PFIYET-CSSSTSCVLAaGAANARSKLEXXXXXXXXXVSSASRSKRqIEAGGTWSGTSSDKVLGL-D 105
                  78*****************88655551555.445554.4444556676234444444334555555666677888884566899******998888.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  g+++g k+ + + ++ ++  ++ dW+++ey+l
  Pbr031128.1 106 GNQIGEKRHFKYTNKGSE--NNGDWLLEEYSL 135
                  99**********944333..478*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-154151IPR003441NAC domain
PROSITE profilePS5100518.8410153IPR003441NAC domain
PfamPF023657.9E-1211135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MRMPLGYWGA PLGCRFHPTD QELVASYLRV RALAGKPLGI PFIYETCSSS TSCVLAAGAA  60
NARSKLEXXX XXXXXXVSSA SRSKRQIEAG GTWSGTSSDK VLGLDGNQIG EKRHFKYTNK  120
GSENNGDWLL EEYSLLPGAV AGAKVVLSRL KRNPRSRCGN KMDSSVPTPE FNEKPPVKRA  180
GKQVLNEKPP VKRKRARTEE LNEKPSVKEE KKEVGSQTNT SASVATIGEL QDCPSTSSSP  240
DEGNRMISET ANNDQECISN IHGNAKMTDF SVHDYVPLMS DVYSDPICLG GEGGGTTRDE  300
EIILHAEEFL LGFDQWLGTV EGESPQEHPQ IDECSQPSDG IKYWTDCLWM SNSANDQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr031128.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018506180.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A498JXP80.0A0A498JXP8_MALDO; Histone-lysine N-methyltransferase
STRINGXP_009339913.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1307323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-08NAC domain containing protein 3