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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr030418.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 265aa MW: 28897 Da PI: 6.3672 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr030418.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.8 | 3.7e-20 | 100 | 149 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae+Aa+a+++a+ +++g
Pbr030418.1 100 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEDAARAYDKAAVEFRG 149
8********.**********82....48***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MPFHANRIQQ EQEHCIMVSA LKHVISGGSI SGPTPQPMPA VYNATSSVST SGTQLAAGQP 60 AQQDNYFSPS LPNQNRNQQL SLGTGFVGMN APTTRKSKNK YRGVRQRPWG KWAAEIRDPR 120 RAARVWLGTF ETAEDAARAY DKAAVEFRGN KAKLNFPSDP GGHIVTTNDS SSSGTSANAS 180 INPGLINKQK QKNISEIGVM EKEEEKVDQV KLNQATQPEN MQLGVVATAE SSVGHEEDDQ 240 FLLWDNGWLR DGEDDDLMAW LSTN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU732470 | 1e-113 | GU732470.1 Malus x domestica AP2 domain class transcription factor (AP2D46) mRNA, complete cds. |