|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr029623.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
NAC |
Protein Properties |
Length: 290aa MW: 33377.7 Da PI: 8.1794 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr029623.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 153.4 | 1.1e-47 | 1 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
+ pGfrF Ptdeelv +yLk+kve++ +++ e ik++diyk++PwdLpk+ + +++e+yfF++r +ky+++ r+nr+t sg+Wkatg dk++ s k+
Pbr029623.1 1 MLPGFRFYPTDEELVGFYLKRKVEKRAIRM-ELIKQIDIYKYDPWDLPKASSVGDNECYFFCRRGRKYRNSVRPNRVTGSGFWKATGIDKPINSVKDP 97
579***************************.99***************8888899*************************************997443 PP
NAM 99 l..vglkktLvfykgrapkgektdWvmheyrl 128
l +glkk+Lv+y+g+a kg+ktdW+m+e+rl
Pbr029623.1 98 LecIGLKKSLVYYRGSAGKGTKTDWMMNEFRL 129
345***************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005992 | Biological Process | trehalose biosynthetic process |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006561 | Biological Process | proline biosynthetic process |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0010120 | Biological Process | camalexin biosynthetic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MLPGFRFYPT DEELVGFYLK RKVEKRAIRM ELIKQIDIYK YDPWDLPKAS SVGDNECYFF 60 CRRGRKYRNS VRPNRVTGSG FWKATGIDKP INSVKDPLEC IGLKKSLVYY RGSAGKGTKT 120 DWMMNEFRLP PSGHGKNAKF LKAKVDVTQE EAEVWTLCRI FKRIPSYRKY TPDCKESTTR 180 QNPTDSSSKT CSFESGIYCS ELHVGLEDSV FQRNERSKPI HVDEQVDETN HWLGGELDPI 240 YDPTPFATTY SSFWNPGDGD FFTNGNWDEL RPVVQLAVDP SSQVYDCRM*
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-44 | 3 | 169 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-44 | 3 | 169 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-44 | 3 | 169 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-44 | 3 | 169 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-44 | 3 | 169 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-44 | 3 | 169 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-44 | 3 | 169 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]
|