PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr028196.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 289aa    MW: 32421.5 Da    PI: 7.6062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr028196.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.6e-051782171155
                  HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  rR +++ +++  L++l+ +      +K + a++L++A  YI  Lq
  Pbr028196.1 178 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASTYIMLLQ 217
                  7999**************99.....9***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.794167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-6178222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-9178225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.97E-5178221No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MRNTDLLPSL SSHLYSCENN IDVQMTNWDA QMDMNSKIGF CMGSNASESD NHDNMRAADY  60
SLPLQQSSSL ITYQPAVNYP SGSLRYDIIS EQSMFLDKKI SAPQFQADCH AIQNARKRPI  120
EVDDFGGLVG DRTSLNELYK HKRSKMTNNN SQQQWHQQLQ ENSMEQQNNK KLYHVPVRRS  180
QKLSDKITAL QKLVSPYGKT DTASVLQEAS TYIMLLQEQI QQNLLRMLGS SYKNAAALHP  240
QESGSGQALD LRSKGLCLVP VSITQKVTME EGSDHLATSR KIVIANNF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr028196.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009337573.10.0PREDICTED: transcription factor bHLH111-like
TrEMBLA0A498KR841e-162A0A498KR84_MALDO; Uncharacterized protein
STRINGXP_009337573.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133551522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.17e-21bHLH family protein