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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pbr027816.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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| Family |
HB-other |
| Protein Properties |
Length: 361aa MW: 40761.4 Da PI: 4.3133 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr027816.1 | genome | CPETR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.9 | 1.9e-09 | 294 | 341 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
+++k q+e+Le++++k++ p+ ++ + + ++L+ ++V WF +R
Pbr027816.1 294 RLKKAQVETLESVYRKTKRPTNAMVSSIVHVTNLPRKRVVKWFEDKRS 341
57899****************************************997 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MAFASALNTP KGLHFLPLPS SLRERPPTNL VLPRHFPTRF SSTLALARRR NHRAEVAPSK 60
TKMKKKSLGK KEVKEAEVEE EDVDEDAIDA LFRLLEEDLK NDDASFDGED LTEEELSKLE 120
QEVAEALGID GDDDVDDDDD DDEEEDDDDD DFVVESYAEE EEEEEEEDDD EDEEEEEEES 180
PVKLKTWQLR RLAAALKVGR RKTSIKTLAA ELCLDRAVVL ELLREPPPSL LMMCAALPDE 240
PATVISVSQT KSVEAVVEAT RETVVETATD SVKLEPAVKV PVHVRQQKFF AQKRLKKAQV 300
ETLESVYRKT KRPTNAMVSS IVHVTNLPRK RVVKWFEDKR SEEGVPDSRV PYQRPAPNTV 360
*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769). {ECO:0000250|UniProtKB:Q70Z19, ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769, ECO:0000269|PubMed:20836879, ECO:0000269|PubMed:21564353}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Constitutively expressed in healthy plants but repressed in response to infection by necrotrophic fungi (PubMed:15923348). Repressed by drought and abscisic acid (ABA) (PubMed:19175769). {ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769}. |
| Publications
? help Back to Top |
- García-Andrade J,Ramírez V,López A,Vera P
Mediated plastid RNA editing in plant immunity.
PLoS Pathog., 2013. 9(10): p. e1003713
[PMID:24204264] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Gamir J,Pastor V,Kaever A,Cerezo M,Flors V
Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina.
Plant J., 2014. 78(2): p. 227-40
[PMID:24506441]
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