PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025900.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 529aa    MW: 58892.1 Da    PI: 7.1626
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025900.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.13.1e-181111233127
          NAM  33 vikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdW 121
                  +++ +d++k+ePw+Lpk    +   + k wy Fs  d k++++ r +r+tk+g+Wk  g +++v    +  +  k+tL+f      +gr++k++ t+W
  Pbr025900.1  11 FLPVIDVLKFEPWELPKrmfpESPYQAKAWYSFSWCDYKSNNSPRFKRKTKQGFWKMNGDQRDVGP--KYFTCKKRTLTFQkktfqEGRRSKSVTTSW 106
                  57889***********645553334788************************************88..55567777888886666579999******* PP

          NAM 122 vmheyr 127
                   mhey 
  Pbr025900.1 107 KMHEYI 112
                  *****5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.9991140IPR003441NAC domain
SuperFamilySSF1019416.41E-215140IPR003441NAC domain
PfamPF023652.2E-631111IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MKSHNSQACL FLPVIDVLKF EPWELPKRMF PESPYQAKAW YSFSWCDYKS NNSPRFKRKT  60
KQGFWKMNGD QRDVGPKYFT CKKRTLTFQK KTFQEGRRSK SVTTSWKMHE YICIKPKRGS  120
SPHQARDQQR GFVLCVLKYK PADSKSNKKK LKATLIRGDL ADGTGNRGYI ASSSGDDEAA  180
TAAATNHMSP NTEEVLAYKQ LEHDLLGSGN QDDGEPGGGS SSDFNQSLRD MIQEFWWQLC  240
PPAGEYLNSH FPLPEPPQPH LPPQLGNAPE VCSGELVDPG TSGCSTYNTD NQAATMNHMV  300
SDTEEILAFK QLERDVFAGG NHDGGEPGSG ILTFGDGNDE TGGWKFSDFD DRAASDMFQE  360
LFPEMGEILN SSSQPLQPPQ PHQPPQPHQT QDYSPSSLQP PLHTVRVEEE DAMTTRVSKG  420
VFYTQEAESP CYQIGFLARD RIITVREAAE NCVVLHLPGK KTKTESLKQA TIGFFHWSIS  480
PKPSIKTPMG NGIILRYQVQ VLASYSGFRS IVVSSGNGVI QDLLRRGC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025900.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018498262.10.0PREDICTED: uncharacterized protein LOC103928005 isoform X1
TrEMBLA0A498KH050.0A0A498KH05_MALDO; Uncharacterized protein
STRINGXP_009335278.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1887626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.38e-15NAC transcription factor-like 9