PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025899.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 574aa    MW: 64319 Da    PI: 6.7598
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025899.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.94e-2331323126
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  + +rFhPt++e   ++L+kk+++++ ++  +++ +d  k+ePw+Lp+    +   + k wy Fs  d k++++ r +r+tk+g+Wk  g++++v    
  Pbr025899.1   3 AAIRFHPTEDEKA-DFLRKKMKNHNSQACLFLPVIDHRKFEPWELPEsmfpESPYQAKAWYSFSWCDYKSNNSPRFKRKTKRGFWKMNGHQRDVGP-- 97 
                  568********99.9**********999888**************9545553334789************************************88.. PP

          NAM  97 gelvglkktLvfy.....kgrapkgektdWvmhey 126
                  ++ +  k+tL+f      +gr++k++ t+W mhey
  Pbr025899.1  98 KHFTCKKRTLTFRkktfqEGRRSKSVTTNWKMHEY 132
                  5567778888888666667999************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.9881161IPR003441NAC domain
PfamPF023655.5E-114132IPR003441NAC domain
SuperFamilySSF1019411.44E-254161IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MVAAIRFHPT EDEKADFLRK KMKNHNSQAC LFLPVIDHRK FEPWELPESM FPESPYQAKA  60
WYSFSWCDYK SNNSPRFKRK TKRGFWKMNG HQRDVGPKHF TCKKRTLTFR KKTFQEGRRS  120
KSVTTNWKMH EYIRIKSKRG SSPHQARDQQ RGLVLCVLKY KPADSKSNKK KLKGTSIRGD  180
FADGTDNRGY IASSSGEDEA ATAAATNHMS PDTEEVLAYK QLEHDLLGSG NQDDGEPGGG  240
SSSDFNQSLS DMIQEFWWQL CPPAGEYLNS HFPLPEPPQP HLPPQLGNAP DVCSGELVDP  300
GASGCITYNT DNQAATMNHM VSDTEEILAF KQLERDVFAG GNHDGGEPGS GNLTFGDGND  360
ETGGWKFSDF DDRAASDMFQ ELFPEMGEIL NSSSQPLQPP QQHQPPQPHQ PQDDCPSTLQ  420
APLHTLPGNV SDVYGDCTRR QSLIPDNISY LGYKNNISTC DPNEQVSKLN GVHDRATEEM  480
FPEVREAAEY CIALHLPGKK TKTMSLKHTV LKQATIGFFH WSISSKPSIK SPLGNGSAAA  540
TWLLESQIYY NNQAPMMMYR LLVLKFEVPS LME*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-14613220138Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025899.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018498259.10.0PREDICTED: uncharacterized protein LOC103927995 isoform X1
RefseqXP_018498260.10.0PREDICTED: uncharacterized protein LOC103927995 isoform X1
TrEMBLA0A498KH050.0A0A498KH05_MALDO; Uncharacterized protein
STRINGXP_009335278.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3863022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.17e-17NAC family protein