PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr025899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 574aa MW: 64319 Da PI: 6.7598 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73.9 | 4e-23 | 3 | 132 | 3 | 126 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 + +rFhPt++e ++L+kk+++++ ++ +++ +d k+ePw+Lp+ + + k wy Fs d k++++ r +r+tk+g+Wk g++++v Pbr025899.1 3 AAIRFHPTEDEKA-DFLRKKMKNHNSQACLFLPVIDHRKFEPWELPEsmfpESPYQAKAWYSFSWCDYKSNNSPRFKRKTKRGFWKMNGHQRDVGP-- 97 568********99.9**********999888**************9545553334789************************************88.. PP NAM 97 gelvglkktLvfy.....kgrapkgektdWvmhey 126 ++ + k+tL+f +gr++k++ t+W mhey Pbr025899.1 98 KHFTCKKRTLTFRkktfqEGRRSKSVTTNWKMHEY 132 5567778888888666667999************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.988 | 1 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.5E-11 | 4 | 132 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-25 | 4 | 161 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 574 aa Download sequence Send to blast |
MVAAIRFHPT EDEKADFLRK KMKNHNSQAC LFLPVIDHRK FEPWELPESM FPESPYQAKA 60 WYSFSWCDYK SNNSPRFKRK TKRGFWKMNG HQRDVGPKHF TCKKRTLTFR KKTFQEGRRS 120 KSVTTNWKMH EYIRIKSKRG SSPHQARDQQ RGLVLCVLKY KPADSKSNKK KLKGTSIRGD 180 FADGTDNRGY IASSSGEDEA ATAAATNHMS PDTEEVLAYK QLEHDLLGSG NQDDGEPGGG 240 SSSDFNQSLS DMIQEFWWQL CPPAGEYLNS HFPLPEPPQP HLPPQLGNAP DVCSGELVDP 300 GASGCITYNT DNQAATMNHM VSDTEEILAF KQLERDVFAG GNHDGGEPGS GNLTFGDGND 360 ETGGWKFSDF DDRAASDMFQ ELFPEMGEIL NSSSQPLQPP QQHQPPQPHQ PQDDCPSTLQ 420 APLHTLPGNV SDVYGDCTRR QSLIPDNISY LGYKNNISTC DPNEQVSKLN GVHDRATEEM 480 FPEVREAAEY CIALHLPGKK TKTMSLKHTV LKQATIGFFH WSISSKPSIK SPLGNGSAAA 540 TWLLESQIYY NNQAPMMMYR LLVLKFEVPS LME* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-14 | 6 | 132 | 20 | 138 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr025899.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018498259.1 | 0.0 | PREDICTED: uncharacterized protein LOC103927995 isoform X1 | ||||
Refseq | XP_018498260.1 | 0.0 | PREDICTED: uncharacterized protein LOC103927995 isoform X1 | ||||
TrEMBL | A0A498KH05 | 0.0 | A0A498KH05_MALDO; Uncharacterized protein | ||||
STRING | XP_009335278.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF38630 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 7e-17 | NAC family protein |