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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr025898.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 411aa MW: 46188.1 Da PI: 5.4201 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr025898.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 91.6 | 1.3e-28 | 24 | 168 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvkaeek.....ewyfFskrdkkyatgkrknratk 79
l pGfrF Ptde l+++yLk+k++g++ ++ +vi+e+d++k+eP dLp+ +++ ++ +++ + ++++ + +
Pbr025898.1 24 LLPGFRFYPTDELLISYYLKNKIQGTDSHFRHVIPEIDVCKYEPCDLPEleckgglpgfkplrP---GQTlppplRVVLLQPARLQVHQQHSLQPGHD 118
579***************************999***************5567777776654430...2233343344555555555444444444688 PP
NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+ k tgk++e+ ++ +++++g k++L+fy+gr pk++ktdWv+hey l
Pbr025898.1 119 QGFYKITGKEREIRAEeSKAVIGKKRILTFYEGRVPKAKKTDWVVHEYYL 168
**************98566779**************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MSSSSISSCM TTEEGDAVHV NVILLPGFRF YPTDELLISY YLKNKIQGTD SHFRHVIPEI 60 DVCKYEPCDL PELECKGGLP GFKPLRPGQT LPPPLRVVLL QPARLQVHQQ HSLQPGHDQG 120 FYKITGKERE IRAEESKAVI GKKRILTFYE GRVPKAKKTD WVVHEYYLSE IQVASKPTKQ 180 MDFVLCRLKN NSASYKKPKG YPIWGELADS GANSEDDQAV VSDVLTEPVQ HLGEKELEIS 240 QVSLSFDDGD DETGVWKFSD FDDPAMFLEL CAEMGEILNS PSQPLQQTPQ PHQPPHPHQP 300 SQPHQPQDYC PPTLQAPLHT LPGNVSYVYG DCTRRQSLIP DDTSYLEYKN NISTCDPNEQ 360 VSKLNGDHDR ATEEMFSEVK EAAEYCIALH LPQKKAKTES LKQATVGFFH *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HF968765 | 7e-94 | HF968765.1 Malus x domestica metacontig of the Co-Gene region, cultivar Procats28, columnar allele. |