PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025458.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 235aa    MW: 26664.1 Da    PI: 9.7814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025458.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84.1e-11108149351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  Pbr025458.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 149
                  79**98..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-5107150IPR001471AP2/ERF domain
SMARTSM003805.6E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MVSLRRRRLL GLGLCCEIPP VLDPLPRVVN NGTTPQNFTR TNPVSVHPMP SNDANQQDGN  60
TIVKAKPRSL TASGSSLSKE QHDVAGPTIK RRKRHRRKHA QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA AHLYDRAAFM CGREPNFELS EGEKQELRKF KWDEFLVMTR  180
HAITNKKHRR RRQGAESEKR SESPQLEDGD WEDDKEEVNG LSASEGAEQD MLDS*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025458.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009334895.11e-177PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
SwissprotQ56XP94e-44ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A498JXZ51e-125A0A498JXZ5_MALDO; Uncharacterized protein
STRINGXP_009334895.11e-176(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-46ERF family protein