|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr025352.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
ERF |
Protein Properties |
Length: 151aa MW: 16715.3 Da PI: 5.0946 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr025352.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.5 | 3.9e-19 | 16 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+++AeIrd + + +r +lg+f taeeAa+a+++a+ +++g
Pbr025352.1 16 KYRGVRTRP-WGKFAAEIRDSTR---QgARLWLGTFNTAEEAARAYDRAAFSMRG 66
7*****999.**********322...24*************************99 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 151 aa
Download sequence Send
to blast |
MERGGKDKEE GQKDMKYRGV RTRPWGKFAA EIRDSTRQGA RLWLGTFNTA EEAARAYDRA 60 AFSMRGPLAI LNFPSEYDLK DAGQSAAAAT TSSSTSSSSS SLSSSSRPHN VTRTESGREI 120 FEFECLDDSV LEDLLDFDDR TKTNEEKQIK *
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HF968765 | 1e-163 | HF968765.1 Malus x domestica metacontig of the Co-Gene region, cultivar Procats28, columnar allele. |