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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr024864.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 268aa MW: 29595 Da PI: 7.943 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr024864.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 59 | 1.6e-18 | 25 | 70 | 82 | 128 |
NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
yWkatg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Pbr024864.1 25 YWKATGTDKVITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 70
8**********99.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
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to blast |
MVLFQSEGPE IPEWVATQSG CWVRYWKATG TDKVITTEGR KVGIKKALVF YVGKAPKGTK 60 TNWIMHEYRL IEPSRKNGSS KLDEWVLCRI YKKSSGSAAA AAAQKPVTSV SSKEHSNGSS 120 SSCSSQLDDV LEWLPDIDDQ NFTLPRINSL KTLLQQQDSK INFQNTSSGN FDWATLAGLN 180 SAPELNLNNQ TEQGQGQMNL NFNNNDVSPF NPASLPRGMA AGEVGKTAEE EVQSGLRTQR 240 VDNSNFFQQH SQNICYPVRP SVFGLWQ*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-41 | 25 | 97 | 97 | 169 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-41 | 25 | 97 | 97 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-41 | 25 | 97 | 97 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-41 | 25 | 97 | 97 | 169 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swm_B | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swm_C | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swm_D | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swp_A | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swp_B | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swp_C | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
3swp_D | 9e-41 | 25 | 97 | 100 | 172 | NAC domain-containing protein 19 |
4dul_A | 9e-41 | 25 | 97 | 97 | 169 | NAC domain-containing protein 19 |
4dul_B | 9e-41 | 25 | 97 | 97 | 169 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198117 | 0.0 | KF198117.1 Malus hupehensis NAC domain protein (NAC33) mRNA, complete cds. |