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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr024863.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 371aa MW: 41371.3 Da PI: 8.8524 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr024863.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 173 | 9.2e-54 | 31 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97
lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ ++
Pbr024863.1 31 LPPGFRFHPTDEELVVHYLKKKATSAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSgGT 127
79****************************.88***************988899***************************************99777 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
++vg+kk Lvfy g+ pkg kt+W+mheyrl
Pbr024863.1 128 QKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 158
88***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045995 | Biological Process | regulation of embryonic development |
GO:0048317 | Biological Process | seed morphogenesis |
GO:0080060 | Biological Process | integument development |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MESTDSSAGS QQKQQQQQQP QPQPPPPQPN LPPGFRFHPT DEELVVHYLK KKATSAPLPV 60 AIIAEVDLYK FDPWELPAKA TFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP 120 VLTSGGTQKV GVKKALVFYG GKPPKGIKTN WIMHEYRLAD NKPNNKPPGC DLGNKKNSLR 180 LDDWVLCRIY KKNNTHRPMD HEREDSMEDI MGPLMPPSIS HVGHHQNMKL HFPKSNSSYG 240 PPFMENDQIF FDGIMSSTDG SASTHQLQLK RPIVPSLYWN NQEDDQTAAD PSSSKRIQLH 300 QLDNGTNSYG DGINGGSTNN NSTSIANLLS QLPRTPPLHQ HAVLGSLGDG IYRTPYQLPG 360 MNWYSESNLG *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-74 | 21 | 195 | 7 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-74 | 21 | 195 | 7 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-74 | 21 | 195 | 7 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-74 | 21 | 195 | 7 | 168 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-74 | 21 | 195 | 7 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-74 | 21 | 195 | 7 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198116 | 0.0 | KF198116.1 Malus hupehensis NAC domain protein (NAC32) mRNA, complete cds. |