|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr024079.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
GATA |
Protein Properties |
Length: 272aa MW: 29853 Da PI: 6.0743 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr024079.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 51.3 | 1.6e-16 | 227 | 262 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34
C++Cgt + Tp++Rrgpdg++tLCnaCGl+++ k
Pbr024079.1 227 CRHCGTNEkcTPMMRRGPDGPRTLCNACGLMWANKA 262
********************************9875 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MDNISGGDAP MHMSDEVHLQ YMQEHEHHQG LHQMSNGNGV TDDHDDGSGA DTGGAELSEV 60 NVQSEPMNLS DTRSGMVDHS GNNGDQLTLS FQGQVFVFDS VSPEKVQAVL LLLGGHEVPP 120 GMPAVPVTTQ HDNRFNQALT SIPQRLSVPQ RLASLIRFRE KRKERNFDKK IRYTVRKEVA 180 LRMQRKKGQF TSSKPNSDDS ASAITSWGSN ENLDQDGNGS IPQEAVCRHC GTNEKCTPMM 240 RRGPDGPRTL CNACGLMWAN KAHDGDDFWN G*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |