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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr023413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 76aa MW: 8968.22 Da PI: 5.4839 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.3 | 2.4e-09 | 29 | 74 | 2 | 48 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 p +rF td+el+ +yL +k +++l++ + + +v+iy+++P++L Pbr023413.1 29 PLRYRFVLTDDELILHYLMRKFMNEQLPI-NRFLNVNIYQHHPRELT 74 55689************************.67999**********95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.15E-11 | 24 | 75 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.223 | 28 | 75 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MEENNQFNNN MVPVLNEVGS VDAHIDSLPL RYRFVLTDDE LILHYLMRKF MNEQLPINRF 60 LNVNIYQHHP RELTG* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr023413.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009334972.1 | 2e-29 | PREDICTED: NAC domain-containing protein 67-like | ||||
TrEMBL | A0A498I352 | 2e-27 | A0A498I352_MALDO; Uncharacterized protein | ||||
STRING | XP_009334972.1 | 8e-29 | (Pyrus x bretschneideri) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 9e-09 | NAC domain containing protein 47 |