PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr022701.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 275aa    MW: 32164.1 Da    PI: 8.0748
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr022701.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.95.6e-08878366
          NAM  3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpkkvka...eekewyfFskrdk 66
                 +GfrF+  d+el++++  +kv  ++    +   +++e+d + +++Pw++  ++ +     ke+yfF+k +k
  Pbr022701.1  8 VGFRFKLADQELINFFFYRKVVLRQpllPRHVGFVHEIDfLGDHQPWEIWDACGGphpYGKEIYFFCKLKK 78
                 6*******************88888685333367****9355789****74333323356799****9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-98117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAGYDDDVGF RFKLADQELI NFFFYRKVVL RQPLLPRHVG FVHEIDFLGD HQPWEIWDAC  60
GGPHPYGKEI YFFCKLKKLS KFYVHEGSEH HHDWYLETYT LASIPDDDQP VAAICRLRKN  120
YHKRKHYTPR KKSKEDQRLK RKRSRENQRT IDANKKVKLS TQLEMGQQPE LGQTLELKQP  180
ERQSCSRNLT TDEKLNINDG VATIGYDQCH SFCVPTTCEI NASYYNYDHY GATNSNWKEY  240
SIYTQSAGAA GGRQRDNVDE YLMRSLHAEN QMLP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122142KRKHYTPRKKSKEDQRLKRKR
2130142KKSKEDQRLKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr022701.1