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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr022349.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
GATA |
Protein Properties |
Length: 324aa MW: 35924.5 Da PI: 5.6992 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr022349.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 58.5 | 8.8e-19 | 242 | 275 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs+C++ kTp+WR gp g+ktLCnaCG+++++ +
Pbr022349.1 242 CSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 275
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MEYCIEAKAL KSSLRRELAA KSTQHVLLEE LWCATGISGV PCEDFSVDDL LDLSNGEFED 60 GSVEEEEEEE ERESVSVDDE ISNSSSLVLP DSDSGLATQL LVPDDDLAEL EWVSHFVDDS 120 LPDLCLLHTI GTQKPDALLM NRFEPETKPV HLRSPLFPFQ VPVKPRTKRY RPASRVWSSS 180 SSCSPSSSPC SSGFSFSTPC LIFNPVQSMD VFVGEPAAKK QKKKQAVQTG EGSIGGQFQR 240 RCSHCQVQKT PQWRTGPLGP KTLCNACGVR FKSGRLFPEY RPACSPTFSG AVHSNSHRKV 300 LEMRKRKDVG EPEPRLNRMI RSF*
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