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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr020001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
WRKY |
Protein Properties |
Length: 330aa MW: 36782.1 Da PI: 7.0329 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr020001.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 90.3 | 1.6e-28 | 170 | 229 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh
Pbr020001.1 170 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCVLVATYEGEHNHM 229
58***************************99****************************5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MDSTWVNTSL GLNLVPLCSA DDHQAPATMQ HELERDYAQF QGNNALVKEE VASHHDVWAE 60 ELNRISVENK KLTETLTALC ENYNSLQSHL RELMITKQQQ NNSSDIYRKR KAGSEDYNNV 120 IGLISPGTNT DTSSISDDQE YSCKRPKEHT NLKISRVYVR TDASDTRLIV KDGYQWRKYG 180 QKVTRDNPSP RAYYKCSFAP SCPVKKKVQK SAENPCVLVA TYEGEHNHMH PESRAEITLI 240 APVSPNQNQQ LITSTPLSVS PSMAKRSAPP TFSCDINRIS PNTTMCPQET EAAAFQQFLI 300 QQMASSLTKD PNFTSALAAA ISGRISDHS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX112907 | 0.0 | JX112907.1 Malus x domestica WRKY transcription factor 40b mRNA, complete cds. |
GenBank | JX112913 | 0.0 | JX112913.1 Malus hupehensis WRKY transcription factor 40b mRNA, complete cds. |