 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pbr019675.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
WRKY |
| Protein Properties |
Length: 343aa MW: 37399.6 Da PI: 9.7356 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr019675.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.9 | 1.5e-31 | 270 | 327 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
Pbr019675.1 270 DDYSWRKYGQKPIKGSPYPRGYYKCSSErGCLARKHVERAVDDPTMLIVTYEGDHNHS 327
99*************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MALELMMGLI DSFAAKREEN AVKEAASAGI QSVEKFISLI SQHHHQSVSS NTEDETEYKE 60
VADMAVTKFR KVISLLDKGR IGHARFRKAP VSQIPTPSIS EPHDQETEQP SVFRTEQSSA 120
FKVYCPTPVV RLPPLPQNPH LKTTPVALKK GIGCAERKMD SAAAATISFS PSAPKTVANS 180
FISSLTAGDA AEQSISSGFQ FTNMSQSSSG RPPLSSSSLK RKCSSVDNVS RLRCGSTTGR 240
CHCSKTRKLK VKRVIRVPAI SMKLADIPPD DYSWRKYGQK PIKGSPYPRG YYKCSSERGC 300
LARKHVERAV DDPTMLIVTY EGDHNHSLSV TDPTATLILE SS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
