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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr019663.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 282aa MW: 31474.5 Da PI: 7.2599 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr019663.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.1 | 4.8e-25 | 12 | 141 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
l+pG+ F P+de+l+++yL k +++ + i+e+d+y+++P +Lp+ ++ ++ ++ ++F+ + + k+r +ksgyW+ +g+ ++v
Pbr019663.1 12 LAPGCGFYPSDEQLLCYYLSSKNASEAgkSGGYDLIRELDLYEHDPFELPEsacySYGHGGRKRHWFCYTVRVL-----KERRAKSGYWRRKGRVRDV 104
579*******************9888854444678**************9546653333555566666665543.....3455699************ PP
NAM 93 lsk.kgelvglkktLvfykgrap.kgektdWvmheyr 127
l + ++ + g + ++vfy g++p ++++tdWv+ +y+
Pbr019663.1 105 LGRgGKVVLGRRSSFVFYLGNSPnDAVRTDWVLYQYA 141
**95555689********886551678*********6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MGDPKATSLL SLAPGCGFYP SDEQLLCYYL SSKNASEAGK SGGYDLIREL DLYEHDPFEL 60 PESACYSYGH GGRKRHWFCY TVRVLKERRA KSGYWRRKGR VRDVLGRGGK VVLGRRSSFV 120 FYLGNSPNDA VRTDWVLYQY AQVDHVKAAF VLCRIFVRSG SGNRISDHGL SSCAEESACT 180 VRHIGIQHDG FHAPTISENE KHGDTSVPRK NEMSKYPLRL DRELDDRVMT GPVSISRIQP 240 NEQVPESVLG GSNPILLDNL AAKHVLCIME GDFIELDDLI D*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-20 | 10 | 164 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-20 | 10 | 164 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-20 | 10 | 164 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-20 | 10 | 164 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-20 | 10 | 164 | 18 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-20 | 10 | 164 | 15 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-20 | 10 | 164 | 15 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198118 | 0.0 | KF198118.1 Malus hupehensis NAC domain protein (NAC41) mRNA, complete cds. |