PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr019211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 298aa MW: 33625.4 Da PI: 5.0538 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.2 | 9e-42 | 19 | 144 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 +GfrFhPt eelv++yLk k ++k++++ e i+evd+++++P dL + + ++ ewyfF ++d ky+++kr+nr+t gyWk tgk++ ++++ +++ Pbr019211.1 19 VGFRFHPTGEELVDHYLKLKKQDKDFKA-ENIPEVDVCNFDPGDLAaLTPSDNDMEWYFFGRKDYKYKNSKRSNRTTPGGYWKITGKERVIKARrSKA 115 7***************************.78**************8334445667************************************9985666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 ++g k+tL+fy+ +pk++kt+Wvmhe Pbr019211.1 116 VIGKKRTLTFYRRCEPKPKKTNWVMHEHY 144 79*************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 46.927 | 17 | 167 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.02E-49 | 19 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-23 | 19 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
METLGSKRKT RGGGGSGQVG FRFHPTGEEL VDHYLKLKKQ DKDFKAENIP EVDVCNFDPG 60 DLAALTPSDN DMEWYFFGRK DYKYKNSKRS NRTTPGGYWK ITGKERVIKA RRSKAVIGKK 120 RTLTFYRRCE PKPKKTNWVM HEHYLIDSEA NPKLPQKDFV ICRMKKKSDE EDTSIGEVEL 180 GSCSVSNVED HAAAVVTPGD NSSSTPLSPG YIELEDVLQA NGINDDCNAI QSPFGDNNYS 240 YTNKNDISTC DEGEPHSFTV SDFESEAPRN ISQEVCPPPE EDLEFFFYLP QLEDYTL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 9e-31 | 20 | 167 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-31 | 20 | 167 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-31 | 20 | 167 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-31 | 20 | 167 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 9e-31 | 20 | 167 | 20 | 165 | NAC domain-containing protein 19 |
4dul_B | 9e-31 | 20 | 167 | 20 | 165 | NAC domain-containing protein 19 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr019211.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018507301.1 | 0.0 | PREDICTED: NAC domain-containing protein 83-like | ||||
TrEMBL | A0A498JJR8 | 1e-166 | A0A498JJR8_MALDO; Uncharacterized protein | ||||
STRING | XP_009376044.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14450 | 5 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 2e-42 | NAC 014 |