PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019210.3
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 545aa    MW: 59744.2 Da    PI: 4.4959
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019210.3genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.29.9e-34872132127
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                   p +rFhPt+ee+  ++L kk+++++ ++ + ++ +d++k+ePwdLp+     +  + k wy Fs+ d ky ++ r nr+t++g+Wk tgk +++ s 
  Pbr019210.3  87 VPAIRFHPTEEEMA-DFLWKKMKNHNSQACHSLPVIDVCKFEPWDLPErmfpDTPYQAKAWYSFSQPDYKYINSPRCNRITEKGFWKITGKPRDISS- 182
                  6889********99.9**********999899***************535553344789************************************99. PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                   ++++  k+tL+fykgr +k+e+t Wvmhey 
  Pbr019210.3 183 -THVTCKKRTLTFYKGRVSKSERTGWVMHEYY 213
                  .77888999**********************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3675241IPR003441NAC domain
PROSITE profilePS5100536.14386241IPR003441NAC domain
PfamPF023656.7E-1588212IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MDTKKSAVPN GIGNKATLED LLLGPTSQTT STNRLLSVEI QVFEASSTPP EIPKGYAFES  60
IDPRGGMGNI SSSTTTSTTA QSVPDMVPAI RFHPTEEEMA DFLWKKMKNH NSQACHSLPV  120
IDVCKFEPWD LPERMFPDTP YQAKAWYSFS QPDYKYINSP RCNRITEKGF WKITGKPRDI  180
SSTHVTCKKR TLTFYKGRVS KSERTGWVMH EYYFTKPKQG SNTSQERDPL RDFVLYRLKK  240
KPNSMSDNKK LQDTLISDDL TDPGNGSCIA SSSGNDQAAT AAAMNHDMTP AAEELLAYKE  300
LEDDLFDSGN HDRGEPGGGI SSDSTDQVIR DMIQQWKSCA PVGEYLNSLL TLPEPPQPPQ  360
PHQPPQLGNA PDVCSDELVD PSTGGCITGN TDNQDAAMNH MISAEEEILA YKQLERALLG  420
NGDHDDGEPG SGISSDFNGL AVDDMILELS AELHKDSDSP FPAPEPPQTN QPHQLGDAPD  480
VHSGEFSNCP SPTNYDNESV INIVYNSQNR ATSERISQDS EAAASALYCF LLIPFEAGME  540
CAAK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-238824419168NO APICAL MERISTEM PROTEIN
1ut4_B7e-238824419168NO APICAL MERISTEM PROTEIN
1ut7_A7e-238824419168NO APICAL MERISTEM PROTEIN
1ut7_B7e-238824419168NO APICAL MERISTEM PROTEIN
3swm_A7e-237524412171NAC domain-containing protein 19
3swm_B7e-237524412171NAC domain-containing protein 19
3swm_C7e-237524412171NAC domain-containing protein 19
3swm_D7e-237524412171NAC domain-containing protein 19
3swp_A7e-237524412171NAC domain-containing protein 19
3swp_B7e-237524412171NAC domain-containing protein 19
3swp_C7e-237524412171NAC domain-containing protein 19
3swp_D7e-237524412171NAC domain-containing protein 19
4dul_A7e-238824419168NAC domain-containing protein 19
4dul_B7e-238824419168NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019210.3
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376032.10.0PREDICTED: NAC domain-containing protein 62-like isoform X1
RefseqXP_018507299.10.0PREDICTED: NAC domain-containing protein 62-like isoform X1
TrEMBLA0A498JK550.0A0A498JK55_MALDO; Uncharacterized protein
STRINGXP_009376032.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1887626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-29NAC domain containing protein 2