PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019026.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 276aa    MW: 30935.5 Da    PI: 8.2334
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019026.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.1e-28106166159
                  ---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ k+++  pr+Y+rC++a +Cpvkkkv+r+ ed ++++ tYegeHnh+
  Pbr019026.1 106 VKDGYQWRKYGQKVTKDNPsSPRAYFRCSFApRCPVKKKVQRCIEDDSILVATYEGEHNHD 166
                  58**************997369********99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-2897167IPR003657WRKY domain
PROSITE profilePS5081123.089101168IPR003657WRKY domain
SuperFamilySSF1182901.96E-23103166IPR003657WRKY domain
SMARTSM007743.8E-32106167IPR003657WRKY domain
PfamPF031063.7E-23107166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MADDRDQVVD SVQEDLQRLR KENEILRFLL QHLTTKRSTL EQQQLRQMHI QQQPCDHRHI  60
MTTNINSAIT SKRQRTDEHP DQFQASHNKT SQFLVKTDSK DNSLIVKDGY QWRKYGQKVT  120
KDNPSSPRAY FRCSFAPRCP VKKKVQRCIE DDSILVATYE GEHNHDAIND SVPFGQFSCS  180
HKNIIMPVNF PSSGIGTNND VINISPSLPE PVTLDLSLSG SSNQENGGLG SPQSMVSPGR  240
VEDYVASLTK DPNFTQTLAA AVARSIARPT NRSNS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-191051661372WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019026.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009347306.10.0PREDICTED: probable WRKY transcription factor 40
TrEMBLA0A498J9J21e-174A0A498J9J2_MALDO; Uncharacterized protein
STRINGXP_009347306.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-42WRKY DNA-binding protein 40