 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pbr017942.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 334aa MW: 37698.3 Da PI: 4.9145 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr017942.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.7 | 4.6e-19 | 78 | 131 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFq rRa++k
Pbr017942.1 78 KKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQTRRARWK 131
5678*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.1 | 8.7e-42 | 77 | 168 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ +qv++LE+sFe+e+kLeperK++la++LglqprqvavWFq rRAR+ktkqlE+dy+ Lk++yd+l + +++ ke+++L++e+
Pbr017942.1 77 EKKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQTRRARWKTKQLERDYDLLKSSYDTLLYNYDSILKENQKLKSEMV 168
69**************************************************************************************9985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MMEPGRLFFD PSPSAVCQQG GGGNMLFLGN PDHVFRGPRS MMGLMDQESS RRRPFFSSSS 60
SQDELFDEEY YDEQLPEKKR RLTPDQVHML EKSFETENKL EPERKTQLAK KLGLQPRQVA 120
VWFQTRRARW KTKQLERDYD LLKSSYDTLL YNYDSILKEN QKLKSEMVSI NEKLGGKEEA 180
NSTKPATFAG DDHDDEKRGP LLPAGDQMTE VVPITSLQHS CTIKAEDRLS SGSGGSAVVD 240
EAEGPQPVDS GDSYNFPNNI HNDYPHDHDT HHHHHQYVAP HDHVEHHHSG VHSEEDDGSD 300
DGQGYFSDVF AAAVAEQQAA QEEGVSLGWW VWS*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 125 | 133 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF529963 | 0.0 | KF529963.1 Malus domestica homeobox-leucine zipper protein mRNA, complete cds. |
