PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr017023.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 339aa    MW: 38570 Da    PI: 6.7924
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr017023.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.54.8e-44181451128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  lppG+rF Ptd+el+ +yL +kv +++l++ + ++ v++y+++P+dL  +    +e+ewyfF++r++ky++g r+ ra+++gyWkatgk  ++++ +g
  Pbr017023.1  18 LPPGYRFVPTDDELILHYLMRKVLNEQLPI-NRFRIVNLYDHHPRDLTgEYNLIRESEWYFFTSRRRKYPKGGRPCRAADNGYWKATGKPDDIKDDNG 114
                  79****************************.7799************9444445889***************************************** PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  +++g k+tL +y+g++ kg+ktdW mhey+l
  Pbr017023.1 115 QVIGSKRTLDYYEGKQGKGTKTDWKMHEYKL 145
                  *****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-5315172IPR003441NAC domain
PROSITE profilePS5100549.89818173IPR003441NAC domain
PfamPF023651.2E-2319145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MVPVLNEVGP VDAYIDSLPP GYRFVPTDDE LILHYLMRKV LNEQLPINRF RIVNLYDHHP  60
RDLTGEYNLI RESEWYFFTS RRRKYPKGGR PCRAADNGYW KATGKPDDIK DDNGQVIGSK  120
RTLDYYEGKQ GKGTKTDWKM HEYKLNKETA PSNQIDGTNM KLDDCVLCKI YKNSRIKKDG  180
KNNDDNAPES TIRTDQEAIL PAVTNTVTSH AFPDQSIQHP YLLTGESSGT TSSIVNKHFV  240
TSTSTTPAYY EQHYFQNQTC SDHPGPIYNC DNQIPPPREP FSSQFPLPNS IEHQIGTGWE  300
SVNGMPVVDS SSIRLLPHVR EYEHALKAMR NNEGQGTW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-431717114166Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr017023.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009374147.10.0PREDICTED: NAC domain-containing protein 67-like
RefseqXP_009374161.10.0PREDICTED: NAC domain-containing protein 67-like
TrEMBLA0A498I3520.0A0A498I352_MALDO; Uncharacterized protein
STRINGXP_009374147.10.0(Pyrus x bretschneideri)
STRINGXP_009374161.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15078714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.21e-43NAC domain containing protein 47