|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr015599.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
GATA |
Protein Properties |
Length: 395aa MW: 42864.4 Da PI: 8.399 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr015599.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 30.6 | 4.6e-10 | 211 | 235 | 1 | 26 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaC 26
Cs C+ttkTplWR+gp+g+k +aC
Pbr015599.1 211 CSDCNTTKTPLWRSGPRGPK-EGKAC 235
*******************9.66655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MAPPPYHNLS PPSPFTLELS GDHHGDHDLQ YHHLFNLEPQ ASFFSSSSLS SPLFLTPAQV 60 QGPSDDHYRE PHQFQFQLLE ADHNIVPHGG SHDHDHEAIE NEGGNGTVLK LSISKNGAVG 120 NGNPGTDHET STSSVKWMSS KMRMMRKMSN PDQTSSSSTS SDDKPISMKL SSHKFEEQKL 180 QHPSSQLGAD MISCSNNSSN NMNNVPIIRV CSDCNTTKTP LWRSGPRGPK EGKACDGGSR 240 SXXXXXXXXX XXXXXAPPPP PAAASGTTLT VAAPSMKSSK VQPKDNKSRI SSTVPFKKRP 300 YNKLSSSPSS RGKSKKLCFE DFTISMKNNS SSGNPTAATT TTAXXXXXXX XXXXXXXXXX 360 XXXXXXXALQ RVFPQDEKEA AILLMALSCG LVHG*
|