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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr015549.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 497aa MW: 56110.1 Da PI: 7.0573 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr015549.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 115 | 7.7e-36 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgy 82
lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + +
Pbr015549.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETR 141
799************.99*******996665443333333666646**********.555666799******************73334555544778 PP
NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l
Pbr015549.1 142 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188
************.999***********5547999999*********98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 497 aa
Download sequence Send
to blast |
MSKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DSKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI MATNSRRDSG 240 SGSCSSKEIL PSHPHRDHDQ MAATAVAAVA AAAPISSYSG IDIHQLKSDH FSFGPFRKSF 300 DEVGIGGEAS TARERPETGT CEEIQEQHQR SVAVQRHHHH HHHMGHELVP DHQQQHQHEH 360 QQQQQQQLHH HQQIATATAF HINRPSHPIS TIISPSPLHH TSIILDQDSY SRLILQNENF 420 QAQQQQQQHQ QQQHHNQQQH HKMGDRSASG LEELIMGCTS SSSNIKEESS MPNPQEAEWM 480 KYSSFWPDPD NPDHHG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198114 | 0.0 | KF198114.1 Malus hupehensis NAC domain protein (NAC16) mRNA, complete cds. |