PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr015429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15457.2 Da PI: 7.4939 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.3 | 1e-21 | 8 | 126 | 2 | 114 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G++FhP+d+elv +yL +kv+g++++ e+vi+e+d+y + e +d+ + + ++++++yfF+k + ++ tg+r r++ sg+Wk ev + Pbr015429.1 8 PVGYKFHPRDDELVGYYLYNKVRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAEVQD 105 89**************************999*******965499999633444333467799**************************9999999988 PP NAM 95 k.kgelvglkktLvfykgrap 114 ++e++g k + + + p Pbr015429.1 106 PkTKETIGFFKRYQYKNTKYP 126 645556776666666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.63E-22 | 5 | 127 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.909 | 7 | 135 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-14 | 8 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MAHSDTFPVG YKFHPRDDEL VGYYLYNKVR GTPFRDENVI PEIDLYGSME ARDIWNNNGG 60 QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AEVQDPKTKE TIGFFKRYQY 120 KNTKYPQESG CWLAP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr015429.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028945244.1 | 1e-69 | NAC domain-containing protein 68-like | ||||
TrEMBL | A0A498IL63 | 3e-83 | A0A498IL63_MALDO; Uncharacterized protein | ||||
STRING | XP_009372720.1 | 3e-92 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 1e-13 | NAC domain containing protein 41 |