PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr015427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 455aa MW: 51739.6 Da PI: 4.504 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.5 | 3.2e-24 | 8 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G++FhP+d+elv +yL +k +g++++ e+vi+e+d+y + e +d+ + + ++++++yfF+k + ++ tg+r r++ sg+Wk +v++ Pbr015427.1 8 PVGYKFHPRDDELVGYYLYNKFRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKVKD 105 89**************************999*******965499999633444333467799**************************9999999998 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g k + + + p+ e+ W+mhe++l Pbr015427.1 106 PkTKETIGFFKRYQYKNTKYPQ-ESGCWIMHEFSL 139 7577789999999999888887.7999******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.27E-27 | 5 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.463 | 7 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-17 | 8 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MAHSDTFPVG YKFHPRDDEL VGYYLYNKFR GTPFRDENVI PEIDLYGSME ARDIWNNNGG 60 QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKE TIGFFKRYQY 120 KNTKYPQESG CWIMHEFSLH PKQVMRINSS PSSRPNDAEY VVCRVRENFD RKRKADDHEE 180 TGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDHYNQQEQ EQTNINATST SSSISVTNVD 240 QRHYNYCEPE QYSEVINQYD IPQQQEQATA TSDPLNVTNL RLAEQQHNFV TQDPTVASSS 300 LAMAGPDNQE QQVQSNVTDL PQYYYDTKEP MTTMATLDTY VCLPELNFVV DPAGLFTRYY 360 YSSTQDPSSG TVSSQYDPPQ STATTGFANQ PHYFVTQDHQ PDYVVADPTV ASSLASPSNL 420 DQNHHIMDQD QLPPLTFDYT PGDIMIDLDD LWNN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr015427.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A498IL63 | 0.0 | A0A498IL63_MALDO; Uncharacterized protein | ||||
STRING | XP_009372720.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 9e-18 | NAC domain containing protein 38 |