PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014648.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 280aa    MW: 30540.2 Da    PI: 6.2703
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014648.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.99.3e-09164183221
                  --SS-EEEEEEE--TT-SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefp 21 
                  dDg++WrKYGqK+++++++p
  Pbr014648.1 164 DDGHAWRKYGQKNIHNAKHP 183
                  8*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-7149183IPR003657WRKY domain
SuperFamilySSF1182907.32E-7156183IPR003657WRKY domain
PROSITE profilePS508119.603158243IPR003657WRKY domain
SMARTSM007745.1E-4163236IPR003657WRKY domain
PfamPF031064.3E-6164183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MEWSWPEGLL SNRGRVMEEL IQGRELASQL SRAFDNRSLV VNGHDGRSAL GIVNKILGSF  60
ANTLLILNGK ETDQEFVSDQ IQGNSRGVGD GGGGVSDGGS SGGGGAYSSS WGANHGHAAA  120
IKPEDYTEEE NSCRSTSTTK DRRGSYKRRK TSHSWTRDTP ALIDDGHAWR KYGQKNIHNA  180
KHPSPTESSK FISFENANWL TNKQEHPFFA SFASSSVKED IATNDHIVTS DHTHSVRHDH  240
PVSHDLTAFE SSGPMSGFSS SIDQYEDGDV FWKTVESLL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014648.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009372032.11e-172PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A498IIQ11e-140A0A498IIQ1_MALDO; Uncharacterized protein
STRINGXP_009372032.11e-171(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-09WRKY DNA-binding protein 70