PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr014522.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 1393aa MW: 156689 Da PI: 6.5953 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 89.7 | 5.1e-28 | 383 | 524 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 lp G++F+P+d el+ +L++k+ + + +e+i++++ i++ +P++Lp + +++ ++++fF+k+ ++yatg+rk+r+ ++ Pbr014522.2 383 LPIGVKFDPSDGELL-VHLAAKCGVGNsqphllI--DEFIPTLEgdngICYDHPKNLPGA-TKDGSSIHFFHKTMNAYATGQRKRRKvdsqrsvaSED 476 699************.678888765554566432..334554423345**********44.4567899******************868888777669 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k++l+ + ++g kk++v+y +++ k+ek +Wvmh+y+l Pbr014522.2 477 VRWHKTGKTKAILE--NGVKGWKKIMVLYksSKKGTKPEKVNWVMHQYHL 524 99***********9..6689*********4434666778*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.200.20 | 1.2E-8 | 1 | 41 | No hit | No description |
SMART | SM00220 | 1.1E-15 | 1 | 193 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 33.559 | 1 | 193 | IPR000719 | Protein kinase domain |
Pfam | PF07714 | 4.1E-38 | 2 | 189 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
SuperFamily | SSF56112 | 2.83E-53 | 2 | 216 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:1.10.510.10 | 2.4E-39 | 42 | 189 | No hit | No description |
PROSITE pattern | PS00108 | 0 | 49 | 61 | IPR008271 | Serine/threonine-protein kinase, active site |
SuperFamily | SSF101941 | 3.01E-32 | 368 | 543 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.823 | 383 | 543 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-12 | 384 | 524 | IPR003441 | NAC domain |
PROSITE profile | PS51295 | 13.804 | 900 | 999 | IPR001890 | RNA-binding, CRM domain |
SuperFamily | SSF75471 | 1.14E-13 | 902 | 975 | IPR001890 | RNA-binding, CRM domain |
SMART | SM01103 | 1.2E-8 | 902 | 977 | IPR001890 | RNA-binding, CRM domain |
Gene3D | G3DSA:3.30.110.60 | 1.6E-9 | 903 | 974 | IPR001890 | RNA-binding, CRM domain |
Pfam | PF01985 | 4.7E-13 | 904 | 973 | IPR001890 | RNA-binding, CRM domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003723 | Molecular Function | RNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1393 aa Download sequence Send to blast |
MVIVTELLLG GTLRKYLFNM RPRCLDTCVA VGFALDIARA MECLHSHGII HRDLKPENLI 60 LTADHKTVKL ADFGLAREES LTEMMTAETG TYRWMAPELY STVTLRHGEK KHYNHKVDAY 120 SFAIVLWELI HNKLPFEGMS NLQAAYAAAF KNVRPSAESL PEDLALIVTS CWKEDPNDRP 180 DFTQIIQMLL HYLSTISAPA PAIPQRIFKS ENAVLPPESP GTSSLMATHN SGETTKTNTD 240 MEDKTRESLA AGPPPRRPKI LSPNLRPGGK GSSIPKLDFP AHTDTLPLCF NLVQCRKGRA 300 LSLSPLSLSK TPYKLGRASS NAVSYFEEMA RAWLINSRGL ASKVKNAARS TACPIKECGA 360 NRECPNCHFV IDNSDVLSEW PGLPIGVKFD PSDGELLVHL AAKCGVGNSQ PHLLIDEFIP 420 TLEGDNGICY DHPKNLPGAT KDGSSIHFFH KTMNAYATGQ RKRRKVDSQR SVASEDVRWH 480 KTGKTKAILE NGVKGWKKIM VLYKSSKKGT KPEKVNWVMH QYHLGAEEDE REGDYVVSKI 540 FYQQHKQSER NDNNVVAEDS DVNALRTSPR TPVSNPPIPP RPGKSVWFED VPDEAMLRSS 600 VKEPELAQEA YHVPQPDPRF EDNIGEPTWL AGESQADDLH SLDETLLCKE IFGSASNLIS 660 NTDFNKNTYE VNGNSSTPCG LRDLENIGLD SPPDFQLPAQ MPKPNPKPKT LKNLSAIEVG 720 REEGNEQSKA LDSRLRPVAV RLKPEPAINV RCEEAQQLQL QVRLFSPPIQ SLQVLSLNAL 780 LRDVSAKVLS SNVVQPSKPS DDCLSSSSRL ANPFDGWSRS MSTSRGSSSM RSKVAKRMQK 840 ESGKTLREVR RAKKLQKKLM TENERLIYNL KRAKRKVALL LQKLKKYELP DLPPPRHDPE 900 LVTVEQLQAL KKVGFKNKNY VPVGVRGVFG GVVQNMHLHW KFHETVQVCC DNFPKEKIKE 960 MASMIARLSG GIVALFKARF EQALESQKLN IKKIEQQLRR SGINPEDPVA IASIQRVASS 1020 FFNAIDQKDG SPYVFHGDKS SIAEPDNKFK HPEPPDEEEE EELDKFIAEI EEAAERECAA 1080 EEAAEKEEFT RMRYWNREEY GGRYRRSEEP ENDDSDDEIP RVRDWRQTHG KQRPNGDYED 1140 DNEEWRSNNV VGSSVLDSDA DDSDGTPERF KISPRDRGRQ DKIGRAKNDE HFYRNSEANN 1200 RKANNRKIMV DDGTESENVL SDLDTAMWKF NSEEKHDSTA SRAANYDFQS SSDEEEDLTY 1260 TKGGKEWVND SESNTGYSNK ACGKFEASRV AEGKHDRRIG RGNSEYFKRN ADVSTRRRPV 1320 EEDVKSKDIS GDSENEIWEL NAASDSGAST TGRIDYNSSD EEDYQVRREE KKGNGNKSTR 1380 TRKDLDEDWD SD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4uy9_A | 9e-28 | 1 | 189 | 83 | 270 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9 |
4uy9_B | 9e-28 | 1 | 189 | 83 | 270 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr014522.2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A498J2E4 | 0.0 | A0A498J2E4_MALDO; Uncharacterized protein | ||||
STRING | VIT_14s0066g00360.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9824 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 6e-89 | NAC domain containing protein 44 |