PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014522.2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 1393aa    MW: 156689 Da    PI: 6.5953
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014522.2genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.75.1e-283835241128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 
                  lp G++F+P+d el+  +L++k+   +      +  +e+i++++    i++ +P++Lp + +++ ++++fF+k+ ++yatg+rk+r+         ++
  Pbr014522.2 383 LPIGVKFDPSDGELL-VHLAAKCGVGNsqphllI--DEFIPTLEgdngICYDHPKNLPGA-TKDGSSIHFFHKTMNAYATGQRKRRKvdsqrsvaSED 476
                  699************.678888765554566432..334554423345**********44.4567899******************868888777669 PP

          NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                   +W++tgk+k++l+  + ++g kk++v+y  +++  k+ek +Wvmh+y+l
  Pbr014522.2 477 VRWHKTGKTKAILE--NGVKGWKKIMVLYksSKKGTKPEKVNWVMHQYHL 524
                  99***********9..6689*********4434666778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.200.201.2E-8141No hitNo description
SMARTSM002201.1E-151193IPR000719Protein kinase domain
PROSITE profilePS5001133.5591193IPR000719Protein kinase domain
PfamPF077144.1E-382189IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF561122.83E-532216IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.102.4E-3942189No hitNo description
PROSITE patternPS0010804961IPR008271Serine/threonine-protein kinase, active site
SuperFamilySSF1019413.01E-32368543IPR003441NAC domain
PROSITE profilePS5100529.823383543IPR003441NAC domain
PfamPF023655.2E-12384524IPR003441NAC domain
PROSITE profilePS5129513.804900999IPR001890RNA-binding, CRM domain
SuperFamilySSF754711.14E-13902975IPR001890RNA-binding, CRM domain
SMARTSM011031.2E-8902977IPR001890RNA-binding, CRM domain
Gene3DG3DSA:3.30.110.601.6E-9903974IPR001890RNA-binding, CRM domain
PfamPF019854.7E-13904973IPR001890RNA-binding, CRM domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0003723Molecular FunctionRNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1393 aa     Download sequence    Send to blast
MVIVTELLLG GTLRKYLFNM RPRCLDTCVA VGFALDIARA MECLHSHGII HRDLKPENLI  60
LTADHKTVKL ADFGLAREES LTEMMTAETG TYRWMAPELY STVTLRHGEK KHYNHKVDAY  120
SFAIVLWELI HNKLPFEGMS NLQAAYAAAF KNVRPSAESL PEDLALIVTS CWKEDPNDRP  180
DFTQIIQMLL HYLSTISAPA PAIPQRIFKS ENAVLPPESP GTSSLMATHN SGETTKTNTD  240
MEDKTRESLA AGPPPRRPKI LSPNLRPGGK GSSIPKLDFP AHTDTLPLCF NLVQCRKGRA  300
LSLSPLSLSK TPYKLGRASS NAVSYFEEMA RAWLINSRGL ASKVKNAARS TACPIKECGA  360
NRECPNCHFV IDNSDVLSEW PGLPIGVKFD PSDGELLVHL AAKCGVGNSQ PHLLIDEFIP  420
TLEGDNGICY DHPKNLPGAT KDGSSIHFFH KTMNAYATGQ RKRRKVDSQR SVASEDVRWH  480
KTGKTKAILE NGVKGWKKIM VLYKSSKKGT KPEKVNWVMH QYHLGAEEDE REGDYVVSKI  540
FYQQHKQSER NDNNVVAEDS DVNALRTSPR TPVSNPPIPP RPGKSVWFED VPDEAMLRSS  600
VKEPELAQEA YHVPQPDPRF EDNIGEPTWL AGESQADDLH SLDETLLCKE IFGSASNLIS  660
NTDFNKNTYE VNGNSSTPCG LRDLENIGLD SPPDFQLPAQ MPKPNPKPKT LKNLSAIEVG  720
REEGNEQSKA LDSRLRPVAV RLKPEPAINV RCEEAQQLQL QVRLFSPPIQ SLQVLSLNAL  780
LRDVSAKVLS SNVVQPSKPS DDCLSSSSRL ANPFDGWSRS MSTSRGSSSM RSKVAKRMQK  840
ESGKTLREVR RAKKLQKKLM TENERLIYNL KRAKRKVALL LQKLKKYELP DLPPPRHDPE  900
LVTVEQLQAL KKVGFKNKNY VPVGVRGVFG GVVQNMHLHW KFHETVQVCC DNFPKEKIKE  960
MASMIARLSG GIVALFKARF EQALESQKLN IKKIEQQLRR SGINPEDPVA IASIQRVASS  1020
FFNAIDQKDG SPYVFHGDKS SIAEPDNKFK HPEPPDEEEE EELDKFIAEI EEAAERECAA  1080
EEAAEKEEFT RMRYWNREEY GGRYRRSEEP ENDDSDDEIP RVRDWRQTHG KQRPNGDYED  1140
DNEEWRSNNV VGSSVLDSDA DDSDGTPERF KISPRDRGRQ DKIGRAKNDE HFYRNSEANN  1200
RKANNRKIMV DDGTESENVL SDLDTAMWKF NSEEKHDSTA SRAANYDFQS SSDEEEDLTY  1260
TKGGKEWVND SESNTGYSNK ACGKFEASRV AEGKHDRRIG RGNSEYFKRN ADVSTRRRPV  1320
EEDVKSKDIS GDSENEIWEL NAASDSGAST TGRIDYNSSD EEDYQVRREE KKGNGNKSTR  1380
TRKDLDEDWD SD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4uy9_A9e-28118983270MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9
4uy9_B9e-28118983270MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014522.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498J2E40.0A0A498J2E4_MALDO; Uncharacterized protein
STRINGVIT_14s0066g00360.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF982434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.16e-89NAC domain containing protein 44